hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-14511380/chunk_1/iprscan-20080502-14511380.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1860 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 361.3 1.5e-105 1 PF00069.15.fs Protein kinase domain 359.4 5.5e-105 1 PF07714.7.fs Protein tyrosine kinase 120.7 6.3e-35 1 PF07714.7.ls Protein tyrosine kinase 121.2 2.7e-33 1 PF00627.21.fs UBA/TS-N domain 29.0 1.6e-07 1 PF00627.21.ls UBA/TS-N domain 31.0 4e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 60 311 .. 1 287 [] 359.4 5.5e-105 PF07714.7.fs 1/1 60 305 .. 1 268 [. 120.7 6.3e-35 PF07714.7.ls 1/1 60 309 .. 1 272 [] 121.2 2.7e-33 PF00069.15.ls 1/1 60 311 .. 1 287 [] 361.3 1.5e-105 PF00627.21.ls 1/1 331 370 .. 1 41 [] 31.0 4e-06 PF00627.21.fs 1/1 331 370 .. 1 41 [] 29.0 1.6e-07 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 60 to 311: score 359.4, E = 5.5e-105 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y+ll+++G+G+f++V++a+h+ tg++VA+Kii+k +++ ++ ++r KIAA1860 60 YRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFR 106 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i+k L+HpNIv+l++v e+++ lylV+Ey+ G + fdyl KIAA1860 107 --EVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAG----EVFDYLV- 149 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++g++ e+ea+ ++Qi++++ Y+H+++i+HRDLK eN+Lld + + KIAA1860 150 --SHGRM--KEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEAN 195 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + KiaDFG++ + +s+l+tf+G+p+Y+APE+ +g +++g++vD KIAA1860 196 I----KIADFGFSNE--FtLGSkLDTFCGSPPYAAPELFQGKKYDGPEVD 239 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGvily l++G +PF+g+ + ++l +++l+++++ +++ + KIAA1860 240 IWSLGVILYTLVSGSLPFDGH-----NLKELRERVLRGKYRVPFYMS--- 281 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++ +++++ L ++P+kR+t e+i++++w+ KIAA1860 282 ------------TDCESILRRFLVLNPAKRCTLEQIMKDKWI 311 PF07714.7.fs: domain 1 of 1, from 60 to 305: score 120.7, E = 6.3e-35 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei +l++++G+G+F +V +++ t+ +VA+K+++k + ++ KIAA1860 60 YRLLRTIGKGNFAKVKLARHI----LTGREVAIKIIdKT-QLNPSS- 100 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++++rE++iMk l +HpNiV+L v+ ++ ly+V+Ey+ G KIAA1860 101 -LQKLFREVRIMKGL-NHPNIVKLFEVIET-EKT----LYLVMEYASAGE 143 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d+L +h ++ + k+ +Qi ++ Y ++kn+vHRDL A N L+ KIAA1860 144 VFDYLVSH---GRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLL 190 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygkFt. + + +KI+DFG + + +k ++ APE ++ +k+ + KIAA1860 191 DAEANIKIADFGFSNEF----TL-GSKLDTFcGSPPYAAPELFQGKKYDg 235 skSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCP + D+WS GV L+ +++ G P + g e+ e++ + yR p + + KIAA1860 236 PEVDIWSLGVILYTLVS-GSLP-FDGHNLKELRERVLRGKYRVPFYM--S 281 delYdlMlqCWaedPedRPtFsel<-* + +++++ +P++R t +++ KIAA1860 282 TDCESILRRFLVLNPAKRCTLEQI 305 PF07714.7.ls: domain 1 of 1, from 60 to 309: score 121.2, E = 2.7e-33 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei +l++++G+G+F +V +++ t+ +VA+K+++k + ++ KIAA1860 60 YRLLRTIGKGNFAKVKLARHI----LTGREVAIKIIdKT-QLNPSS- 100 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++++rE++iMk l +HpNiV+L v+ ++ ly+V+Ey+ G KIAA1860 101 -LQKLFREVRIMKGL-NHPNIVKLFEVIET-EKT----LYLVMEYASAGE 143 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d+L +h ++ + k+ +Qi ++ Y ++kn+vHRDL A N L+ KIAA1860 144 VFDYLVSH---GRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLL 190 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygkFt. + + +KI+DFG + + +k ++ APE ++ +k+ + KIAA1860 191 DAEANIKIADFGFSNEF----TL-GSKLDTFcGSPPYAAPELFQGKKYDg 235 skSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCP + D+WS GV L+ +++ G P + g e+ e++ + yR p + + KIAA1860 236 PEVDIWSLGVILYTLVS-GSLP-FDGHNLKELRERVLRGKYRVPFYM--S 281 delYdlMlqCWaedPedRPtFselveeL<-* + +++++ +P++R t +++ + KIAA1860 282 TDCESILRRFLVLNPAKRCTLEQIMKDK 309 PF00069.15.ls: domain 1 of 1, from 60 to 311: score 361.3, E = 1.5e-105 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y+ll+++G+G+f++V++a+h+ tg++VA+Kii+k +++ ++ ++r KIAA1860 60 YRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFR 106 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++i+k L+HpNIv+l++v e+++ lylV+Ey+ G + fdyl KIAA1860 107 --EVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAG----EVFDYLV- 149 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++g++ e+ea+ ++Qi++++ Y+H+++i+HRDLK eN+Lld + + KIAA1860 150 --SHGRM--KEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEAN 195 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + KiaDFG++ + +s+l+tf+G+p+Y+APE+ +g +++g++vD KIAA1860 196 I----KIADFGFSNE--FtLGSkLDTFCGSPPYAAPELFQGKKYDGPEVD 239 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGvily l++G +PF+g+ + ++l +++l+++++ +++ + KIAA1860 240 IWSLGVILYTLVSGSLPFDGH-----NLKELRERVLRGKYRVPFYMS--- 281 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++ +++++ L ++P+kR+t e+i++++w+ KIAA1860 282 ------------TDCESILRRFLVLNPAKRCTLEQIMKDKWI 311 PF00627.21.ls: domain 1 of 1, from 331 to 370: score 31.0, E = 4e-06 *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-* d + ++ ++ M G++ree+k+ L + ++n+ +A++ Ll + KIAA1860 331 GDTKRIEVMVGM-GYTREEIKESLTSQKYNEVTATYLLLGR 370 PF00627.21.fs: domain 1 of 1, from 331 to 370: score 29.0, E = 1.6e-07 *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-* d + ++ ++ M G++ree+k+ L + ++n+ +A++ Ll + KIAA1860 331 GDTKRIEVMVGM-GYTREEIKESLTSQKYNEVTATYLLLGR 370 //