hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14304874/chunk_1/iprscan-20080502-14304874.nocrc
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Query sequence: KIAA1848
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00721                                                 320.1    1.6e-91   1
SM00326                                                  56.4    3.6e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00721    1/1      48   325 ..     1   260 []   320.1  1.6e-91
SM00326    1/1     388   445 .]     1    58 []    56.4  3.6e-12

Alignments of top-scoring domains:
SM00721: domain 1 of 1, from 48 to 325: score 320.1, E = 1.6e-91
                   *->glkKaA..ffnRakqkvgeKvGkaekTkvLDedFeelerrfdtteae
                      +l+ +A+ ff Ra+q+++eK+G+aekT+ LD +Fe+l+ r+d+t+++
    KIAA1848    48    KLASDAgiFFTRAVQFTEEKFGQAEKTE-LDAHFENLLARADSTKNW 93   

                   teklqkdtkeylQpnrpalraklasqkklskslgevyeggyPqaeelLae
                   tek++++t+  lQpn p++r++++ ++kl+++++ + ++g     elLa+
    KIAA1848    94 TEKILRQTEVLLQPN-PSARVEEFLYEKLDRKVPSRVTNG-----ELLAQ 137  

                   amidageglgadsslygkaldklgealkkllqakeslddqvkqtfilpll
                   +m+da+++lg +++ ygk+l+k++ea+k+l++a++++++++ + f+ pl+
    KIAA1848   138 YMADAASELGPTTP-YGKTLIKVAEAEKQLGAAERDFIHTASISFLTPLR 186  

                   nfllkefkeikkarkKlerkrLDyDsartklkkakkkkekkkkdeaklak
                   nfl++++k+i k+r+ l+++rLD+D+++++lkkak++++k+    +++++
    KIAA1848   187 NFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATCEGDTVPD 236  

                   .........................aeEelreAkqefEelneqLveeLpq
                    +++++++   + + +   +++ ++ae+elr+A+ ef++ +++++++L++
    KIAA1848   237 fqetrprnyilsasasalwndevdkAEQELRVAQTEFDR-QAEVTRLLLE 285  

                   lidsrvdffvnslqalieaqlryhresykllqqlqqqldk<-*
                   +i+s + +++++l+++++ q+ y++++y ++ +lq+ql++   
    KIAA1848   286 GISSTHVNHLRCLHEFVKSQTTYYAQCYRHMLDLQKQLGS    325  

SM00326: domain 1 of 1, from 388 to 445: score 56.4, E = 3.6e-12
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks..ddgWweGelnrtGk
                      +++++lYDyea ++ EL + +++ itv +  + d++W+ Ge++  +k
    KIAA1848   388    RKARVLYDYEAADSSELALLADELITVYSLPgmDPDWLIGERG--NK 432  

                   eGlfPsnYVeeie<-*
                   +G +P +Y+e++    
    KIAA1848   433 KGKVPVTYLELLS    445  

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