hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14304874/chunk_1/iprscan-20080502-14304874.nocrc
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Query sequence: KIAA1848
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03114.8.fs BAR domain                                     263.3    4.6e-76   2
PF03114.8.ls BAR domain                                     255.4    1.1e-73   1
PF07653.7.fs Variant SH3 domain                              37.9    2.8e-10   1
PF00018.18.fs SH3 domain                                      39.8    4.2e-10   1
PF00018.18.ls SH3 domain                                      41.7    2.3e-09   1
PF07653.7.ls Variant SH3 domain                              39.7    9.2e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03114.8.fs   1/2      49   226 ..     1   186 [.   199.5  7.5e-57
PF03114.8.ls   1/1      49   325 ..     1   264 []   255.4  1.1e-73
PF03114.8.fs   2/2     261   325 ..   196   264 .]    63.8  1.4e-17
PF00018.18.ls   1/1     388   444 ..     1    59 []    41.7  2.3e-09
PF00018.18.fs   1/1     388   444 ..     1    59 []    39.8  4.2e-10
PF07653.7.ls   1/1     389   444 ..     1    69 []    39.7  9.2e-09
PF07653.7.fs   1/1     389   444 ..     1    69 []    37.9  2.8e-10

Alignments of top-scoring domains:
PF03114.8.fs: domain 1 of 2, from 49 to 226: score 199.5, E = 7.5e-57
                   *->lkKqAGgffnRasqllkeKvGkaekTkvLDedFeelerrfdtteklv
                      l+ +AG ff Ra q+++eK+G aekT+ LD +Fe+l  r+d t++++
    KIAA1848    49    LASDAGIFFTRAVQFTEEKFGQAEKTE-LDAHFENLLARADSTKNWT 94   

                   kklvketklYlqpnpaarakqkvleklskrrgqvkrkgypqPetlLaetm
                   +k+ ++t+  lqpnp ar++++ +ekl+  r+ ++r ++ +   lLa++m
    KIAA1848    95 EKILRQTEVLLQPNPSARVEEFLYEKLD--RKVPSRVTNGE---LLAQYM 139  

                   qeigeelgddsedPfGkaLekygeamkqlaqlleqldervkqnfldPltn
                    ++  elg+ ++  +Gk+L+k+ ea+kql+ ++++++ ++   fl+Pl+n
    KIAA1848   140 ADAASELGPTTP--YGKTLIKVAEAEKQLGAAERDFIHTASISFLTPLRN 187  

                   llekefkeiqkhikKlerKrLDyDakrtrlkkaktkksk<-*
                   +le++ k+i k+++ l+++rLD+Da+++rlkkak+ + k   
    KIAA1848   188 FLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAK    226  

PF03114.8.ls: domain 1 of 1, from 49 to 325: score 255.4, E = 1.1e-73
                   *->lkKqAGgffnRasqllkeKvGkaekTkvLDedFeelerrfdtteklv
                      l+ +AG ff Ra q+++eK+G aekT+ LD +Fe+l  r+d t++++
    KIAA1848    49    LASDAGIFFTRAVQFTEEKFGQAEKTE-LDAHFENLLARADSTKNWT 94   

                   kklvketklYlqpnpaarakqkvleklskrrgqvkrkgypqPetlLaetm
                   +k+ ++t+  lqpnp ar++++ +ekl+  r+ ++r ++ +   lLa++m
    KIAA1848    95 EKILRQTEVLLQPNPSARVEEFLYEKLD--RKVPSRVTNGE---LLAQYM 139  

                   qeigeelgddsedPfGkaLekygeamkqlaqlleqldervkqnfldPltn
                    ++  elg+ ++  +Gk+L+k+ ea+kql+ ++++++ ++   fl+Pl+n
    KIAA1848   140 ADAASELGPTTP--YGKTLIKVAEAEKQLGAAERDFIHTASISFLTPLRN 187  

                   llekefkeiqkhikKlerKrLDyDakrtrlkkaktkkskka.........
                   +le++ k+i k+++ l+++rLD+Da+++rlkkak+ + k + ++++ ++ 
    KIAA1848   188 FLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATcegdtvpdf 237  

                   .....kDekklakA........dqleeElrqAqqkfEelneeLkeeLpnl
                   +++++++    a A+   +++ d +e+Elr+Aq +f++++e ++ +L+++
    KIAA1848   238 qetrpRNYILSASAsalwndevDKAEQELRVAQTEFDRQAEVTRLLLEGI 287  

                   leleveflvnqlqafveaqldfhrqsaqlleqlqqqLdk<-*
                   ++++v +l ++l+ fv+ q ++++q++  + +lq qL++   
    KIAA1848   288 SSTHVNHL-RCLHEFVKSQTTYYAQCYRHMLDLQKQLGS    325  

PF03114.8.fs: domain 2 of 2, from 261 to 325: score 63.8, E = 1.4e-17
                   *->kAdqleeElrqAqqkfEelneeLkeeLpnlleleveflvnqlqafve
                      kA   e+Elr+Aq +f++++e ++ +L+++++++v +l ++l+ fv+
    KIAA1848   261    KA---EQELRVAQTEFDRQAEVTRLLLEGISSTHVNHL-RCLHEFVK 303  

                   aqldfhrqsaqlleqlqqqLdk<-*
                    q ++++q++  + +lq qL++   
    KIAA1848   304 SQTTYYAQCYRHMLDLQKQLGS    325  

PF00018.18.ls: domain 1 of 1, from 388 to 444: score 41.7, E = 2.3e-09
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd..pgWWkgrlkgtg
                      +k+++LYDYea +s+EL +   + itv +  ++ +p+W+ g++    
    KIAA1848   388    RKARVLYDYEAADSSELALLADELITVYS-LPGmdPDWLIGERG--- 430  

                   GkeGliPsNYVepv<-*
                   +k+G +P++Y+e+    
    KIAA1848   431 NKKGKVPVTYLELL    444  

PF00018.18.fs: domain 1 of 1, from 388 to 444: score 39.8, E = 4.2e-10
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd..pgWWkgrlkgtg
                      +k+++LYDYea +s+EL +   + itv +  ++ +p+W+ g++    
    KIAA1848   388    RKARVLYDYEAADSSELALLADELITVYS-LPGmdPDWLIGERG--- 430  

                   GkeGliPsNYVepv<-*
                   +k+G +P++Y+e+    
    KIAA1848   431 NKKGKVPVTYLELL    444  

PF07653.7.ls: domain 1 of 1, from 389 to 444: score 39.7, E = 9.2e-09
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidv..ggskdddgw
                      ++r++ dy+a +d +e      L+l +++++ V+   +g   +d++w
    KIAA1848   389    KARVLYDYEA-ADSSE------LALLADELITVY-SlpG---MDPDW 424  

                   wegeslggGrrrRGlvPssaveel<-*
                     ge+  g+++  G vP +++e l   
    KIAA1848   425 LIGER--GNKK--GKVPVTYLELL    444  

PF07653.7.fs: domain 1 of 1, from 389 to 444: score 37.9, E = 2.8e-10
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidv..ggskdddgw
                      ++r++ dy+a +d +e      L+l +++++ V+   +g   +d++w
    KIAA1848   389    KARVLYDYEA-ADSSE------LALLADELITVY-SlpG---MDPDW 424  

                   wegeslggGrrrRGlvPssaveel<-*
                     ge+  g+++  G vP +++e l   
    KIAA1848   425 LIGER--GNKK--GKVPVTYLELL    444  

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