# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj20412mrp1.fasta.nr -Q ../query/KIAA1841.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1841, 523 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826381 sequences Expectation_n fit: rho(ln(x))= 4.9817+/-0.000189; mu= 12.6373+/- 0.011 mean_var=81.6180+/-16.129, 0's: 42 Z-trim: 43 B-trim: 1457 in 1/66 Lambda= 0.141965 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|123122613|emb|CAM16942.1| novel protein [Mus mu ( 572) 3193 663.9 3.2e-188 gi|51261340|gb|AAH79876.1| RIKEN cDNA 0610010F05 g ( 718) 3194 664.2 3.3e-188 gi|49119723|gb|AAH72622.1| 0610010F05Rik protein [ ( 615) 2469 515.7 1.5e-143 gi|148675944|gb|EDL07891.1| RIKEN cDNA 0610010F05, ( 392) 2425 506.5 5.5e-141 gi|47221730|emb|CAG10202.1| unnamed protein produc ( 528) 1908 400.7 5.1e-109 gi|123122612|emb|CAM16941.1| novel protein [Mus mu ( 213) 1239 263.3 4.8e-68 gi|12832467|dbj|BAB22119.1| unnamed protein produc ( 183) 1096 233.9 2.8e-59 gi|47077022|dbj|BAD18445.1| unnamed protein produc ( 379) 1079 230.8 5.3e-58 gi|156219005|gb|EDO39893.1| predicted protein [Nem ( 306) 1004 215.3 1.9e-53 gi|210114052|gb|EEA61815.1| hypothetical protein B ( 546) 962 207.0 1.1e-50 gi|74210757|dbj|BAE25029.1| unnamed protein produc ( 152) 902 194.1 2.3e-47 gi|123122614|emb|CAM16943.1| novel protein [Mus mu ( 189) 839 181.3 2e-43 gi|26343787|dbj|BAC35550.1| unnamed protein produc ( 189) 839 181.3 2e-43 gi|212514935|gb|EEB17159.1| conserved hypothetical ( 577) 733 160.1 1.5e-36 gi|66565594|ref|XP_395466.2| PREDICTED: similar to ( 673) 700 153.4 1.8e-34 gi|210110732|gb|EEA58559.1| hypothetical protein B ( 624) 690 151.3 7.2e-34 gi|157016887|gb|EAL40403.3| AGAP004888-PA [Anophel ( 806) 677 148.8 5.5e-33 gi|108880216|gb|EAT44441.1| conserved hypothetical ( 765) 673 147.9 9.3e-33 gi|167879830|gb|EDS43213.1| conserved hypothetical ( 767) 669 147.1 1.6e-32 gi|194154423|gb|EDW69607.1| GJ13346 [Drosophila vi ( 892) 660 145.3 6.6e-32 gi|193919608|gb|EDW18475.1| GI12076 [Drosophila mo ( 888) 650 143.3 2.7e-31 gi|193897687|gb|EDV96553.1| GH15139 [Drosophila gr ( 901) 640 141.2 1.1e-30 gi|194179364|gb|EDW92975.1| GE21217 [Drosophila ya ( 887) 633 139.8 3e-30 gi|190653996|gb|EDV51239.1| GG14015 [Drosophila er ( 887) 633 139.8 3e-30 gi|194118869|gb|EDW40912.1| GM24849 [Drosophila se ( 889) 629 139.0 5.3e-30 gi|16182623|gb|AAL13537.1| GH07092p [Drosophila me ( 828) 628 138.7 5.8e-30 gi|194196317|gb|EDX09893.1| GD12901 [Drosophila si ( 889) 628 138.8 6.1e-30 gi|7294891|gb|AAF50221.1| CG6761 [Drosophila melan ( 889) 628 138.8 6.1e-30 gi|190623616|gb|EDV39140.1| GF24648 [Drosophila an ( 914) 626 138.4 8.3e-30 gi|194158576|gb|EDW73477.1| GK17569 [Drosophila wi ( 902) 624 138.0 1.1e-29 gi|198151524|gb|EAL30566.2| GA28659 [Drosophila ps ( 882) 621 137.3 1.7e-29 gi|194112743|gb|EDW34786.1| GL12851 [Drosophila pe ( 883) 621 137.3 1.7e-29 gi|163773357|gb|EDQ86998.1| predicted protein [Mon ( 788) 361 84.0 1.6e-13 gi|190581634|gb|EDV21710.1| hypothetical protein T ( 278) 201 50.8 0.00057 >>gi|123122613|emb|CAM16942.1| novel protein [Mus muscul (572 aa) initn: 3193 init1: 3193 opt: 3193 Z-score: 3535.3 bits: 663.9 E(): 3.2e-188 Smith-Waterman score: 3193; 88.109% identity (97.661% similar) in 513 aa overlap (11-523:60-572) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTKENKDCEMPTLEPGNVISILISS :..::::::.::::.:.::::::::::::: gi|123 FAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISS 30 40 50 60 70 80 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF :::::::::::::::::::::::::.:::::::::::::::::::.:::.:::::::::: gi|123 EFLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKF 90 100 110 120 130 140 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG .:::::::::::::::: :::::.::::::::::::::::.:::::::::::::::::.: gi|123 RSKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHG 150 160 170 180 190 200 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ ::.:::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|123 NIIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQ 210 220 230 240 250 260 230 240 250 260 270 280 KIAA18 YHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDL ::::.::: ....::::::::::::::::::::::::::::::::::::.:.::::. : gi|123 YHSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDS 270 280 290 300 310 320 290 300 310 320 330 340 KIAA18 PSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGEL :::: :..::::::..:::.::: ::.::: ::: :::::.: ..::::::::: ::::: gi|123 PSCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGEL 330 340 350 360 370 380 350 360 370 380 390 400 KIAA18 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPK :::::::::::::::::::::::::::::::::::::::::..:::::::::::::. :: gi|123 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPK 390 400 410 420 430 440 410 420 430 440 450 460 KIAA18 KQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEIT ::.::::.:.:::.::::.::::::::.:::::::::.::::::::::::::::::.::: gi|123 KQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEIT 450 460 470 480 490 500 470 480 490 500 510 520 KIAA18 GHLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKNTRSKSRFGQG :::::::::::::::.::.::::::::::::::..:::::.:::.::.:: ::::::::: gi|123 GHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQG 510 520 530 540 550 560 KIAA18 RPA ::: gi|123 RPA 570 >>gi|51261340|gb|AAH79876.1| RIKEN cDNA 0610010F05 gene (718 aa) initn: 3194 init1: 3194 opt: 3194 Z-score: 3535.2 bits: 664.2 E(): 3.3e-188 Smith-Waterman score: 3194; 88.109% identity (97.661% similar) in 513 aa overlap (11-523:206-718) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTKENKDCEMPTLEPGNVISILISS :..::::::.::::.:.::::::::::::: gi|512 FAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISS 180 190 200 210 220 230 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF :::::::::::::::::::::::::.:::::::::::::::::::.:::.:::::::::: gi|512 EFLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKF 240 250 260 270 280 290 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG .:::::::::::::::: :::::.::::::::::::::::.:::::::::::::::::.: gi|512 RSKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHG 300 310 320 330 340 350 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ ::.:::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|512 NIIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQ 360 370 380 390 400 410 230 240 250 260 270 280 KIAA18 YHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDL ::::.::: ....::::::::::::::::::::::::::::::::::::.:.::::. : gi|512 YHSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDS 420 430 440 450 460 470 290 300 310 320 330 340 KIAA18 PSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGEL :::: :..::::::..:::.::: ::.::: ::: :::::.: ..::::::::: ::::: gi|512 PSCPPAKLLDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGEL 480 490 500 510 520 530 350 360 370 380 390 400 KIAA18 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPK :::::::::::::::::::::::::::::::::::::::::..:::::::::::::. :: gi|512 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPK 540 550 560 570 580 590 410 420 430 440 450 460 KIAA18 KQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEIT ::.::::.:.:::.::::.::::::::.:::::::::.::::::::::::::::::.::: gi|512 KQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEIT 600 610 620 630 640 650 470 480 490 500 510 520 KIAA18 GHLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKNTRSKSRFGQG :::::::::::::::.::.::::::::::::::..:::::.:::.::.:: ::::::::: gi|512 GHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQG 660 670 680 690 700 710 KIAA18 RPA ::: gi|512 RPA >>gi|49119723|gb|AAH72622.1| 0610010F05Rik protein [Mus (615 aa) initn: 2469 init1: 2469 opt: 2469 Z-score: 2733.5 bits: 515.7 E(): 1.5e-143 Smith-Waterman score: 2469; 88.491% identity (97.187% similar) in 391 aa overlap (11-401:206-596) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTKENKDCEMPTLEPGNVISILISS :..::::::.::::.:.::::::::::::: gi|491 FAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYVKRNTKESKDCEIPALEPGNVISILISS 180 190 200 210 220 230 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF :::::::::::::::::::::::::.:::::::::::::::::::.:::.:::::::::: gi|491 EFLKMDSLVEQCIQYCHKNMNAIVAAPCNMNCINANLLTRIADLFTHNEIDDLKDKKDKF 240 250 260 270 280 290 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG .:::::::::::::::: :::::.::::::::::::::::.:::::::::::::::::.: gi|491 RSKLFCKKIERLFDPEYSNPDSRNNAATLYRCCLCKKLLTRETERRIPCIPGKINVDRHG 300 310 320 330 340 350 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ ::.:::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|491 NIIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQ 360 370 380 390 400 410 230 240 250 260 270 280 KIAA18 YHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDL ::::.::: ....::::::::::::::::::::::::::::::::::::.:.::::. : gi|491 YHSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDS 420 430 440 450 460 470 290 300 310 320 330 340 KIAA18 PSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGEL :::: :..::::::..:::.::: ::.::: ::: :::::.: ..::::::::: ::::: gi|491 PSCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGEL 480 490 500 510 520 530 350 360 370 380 390 400 KIAA18 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPK :::::::::::::::::::::::::::::::::::::::::..:::::::::::::. :: gi|491 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPK 540 550 560 570 580 590 410 420 430 440 450 460 KIAA18 KQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEIT : gi|491 KTTVLTLFSKEREDTGEVNF 600 610 >>gi|148675944|gb|EDL07891.1| RIKEN cDNA 0610010F05, iso (392 aa) initn: 2425 init1: 2425 opt: 2425 Z-score: 2687.3 bits: 506.5 E(): 5.5e-141 Smith-Waterman score: 2425; 87.245% identity (97.194% similar) in 392 aa overlap (132-523:1-392) 110 120 130 140 150 160 KIAA18 SKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRGN :::::::::.:::::::::::::::::.:: gi|148 CCLCKKLLTRETERRIPCIPGKINVDRHGN 10 20 30 170 180 190 200 210 220 KIAA18 IVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQY :.:::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|148 IIYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTVNWLTCSRCYQAFLCIEFSHCQY 40 50 60 70 80 90 230 240 250 260 270 280 KIAA18 HSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLP :::.::: ....::::::::::::::::::::::::::::::::::::.:.::::. : : gi|148 HSEVVVYSSTVNSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVVLHDQGENDDSP 100 110 120 130 140 150 290 300 310 320 330 340 KIAA18 SCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELN ::: :..::::::..:::.::: ::.::: ::: :::::.: ..::::::::: :::::: gi|148 SCPPAKILDDLHKHKDVIAVPFLKDAVSDPGVGSCDEKGLEYEILLEPNTPWGSKTGELN 160 170 180 190 200 210 350 360 370 380 390 400 KIAA18 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKK ::::::::::::::::::::::::::::::::::::::::..:::::::::::::. ::: gi|148 AFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKEKPKKFTKPPKK 220 230 240 250 260 270 410 420 430 440 450 460 KIAA18 QVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRMTEITG :.::::.:.:::.::::.::::::::.:::::::::.::::::::::::::::::.:::: gi|148 QLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQREDDQRRMSEITG 280 290 300 310 320 330 470 480 490 500 510 520 KIAA18 HLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKNTRSKSRFGQGR ::::::::::::::.::.::::::::::::::..:::::.:::.::.:: :::::::::: gi|148 HLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKNQRSKSRFGQGR 340 350 360 370 380 390 KIAA18 PA :: gi|148 PA >>gi|47221730|emb|CAG10202.1| unnamed protein product [T (528 aa) initn: 1881 init1: 1277 opt: 1908 Z-score: 2113.4 bits: 400.7 E(): 5.1e-109 Smith-Waterman score: 1908; 59.916% identity (79.541% similar) in 479 aa overlap (12-485:61-527) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTK-ENKDCEMPTLEPGNVISILISS ...::: :::: : :::.::::::::: gi|472 AEYLSVDTQRWEEVDISVHCDVQIFDWLMNYVRRNTAGENKD--KPRLEPSNVISILISS 40 50 60 70 80 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF ::::::.:::.:::::::.:.:::::::::::::.:: :::.:::.:::.::..:::::: gi|472 EFLKMDTLVEECIQYCHKHMSAIVATPCNMNCINSNLATRITDLFNHNEADDVRDKKDKF 90 100 110 120 130 140 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG ::::: ::::::::: : : :: .::.::::: :: :::::.::..: :.::::::: :: gi|472 KSKLFQKKIERLFDPGYQNRDSPGNASTLYRCALCLKLLTKDTEKKISCVPGKINVDSRG 150 160 170 180 190 200 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ .:.: : :.: ::::::...:.:::::: ::::.:::::.:::::: :.:.: :..::. gi|472 EIIYTHNRQKCWDVHEYITGLYEELKSWVLVYWRIWGTINYLTCSRCQQVFMCTELTHCK 210 220 230 240 250 260 230 240 250 260 270 280 KIAA18 YHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDL :: .: :: ... . :.:.::::::..:::::: . :::. :::.:. :. gi|472 YHPVSVSYPGMGTDRGWHGAGLYPCCNQRALRFDPTGMPKGCRNRDHVVNTGDE------ 270 280 290 300 310 320 290 300 310 320 330 KIAA18 PSCPTARM--LDDLHKYRDVIVVPFSKDTVSDVGVGLCD-EKGIECDVLLEPNTPWGPKT .: ... :::: .::.. . . . .: : :. .:.::::: : :: gi|472 -NCDEVQIGVLDDLLLHRDAVCLSVTPPS-EGAGDDPCAVERLPDCEVLLEP-TLLGPLR 330 340 350 360 370 340 350 360 370 380 390 KIAA18 GELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTR :. . : :::.:::.::. ::.:::::::::::::::::::.::.: . : .. .. gi|472 GDCSPFSLWKNWSLQLRQQAQQSEDEEYTTGSEVTEDEVGDEEELSKHQGEAVKKSRRAQ 380 390 400 410 420 430 400 410 420 430 440 450 KIAA18 QP-KKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQREDDQRRM .: ::. ::: : :.::. :: ::: .::..::::.:::::::.:.:::::::.:: :: gi|472 RPLKKHSSSPNIQLKDKAV-KSQSRDNNPFIVSMQKSKWDATRSMRYNQDAQREEDQYRM 440 450 460 470 480 490 460 470 480 490 500 510 KIAA18 TEITGHLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKNTRSKSR :: .:: :::.:. .. : :..:: . : gi|472 IEIISHLTKMRFGEEEHNKMKDTKEVSMGC 500 510 520 >>gi|123122612|emb|CAM16941.1| novel protein [Mus muscul (213 aa) initn: 1239 init1: 1239 opt: 1239 Z-score: 1377.9 bits: 263.3 E(): 4.8e-68 Smith-Waterman score: 1239; 86.321% identity (96.698% similar) in 212 aa overlap (301-512:2-213) 280 290 300 310 320 330 KIAA18 LRDQGEGGDLPSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPN ::: ::.::: ::: :::::.: ..::::: gi|123 AVPFLKDAVSDPGVGSCDEKGLEYEILLEPN 10 20 30 340 350 360 370 380 390 KIAA18 TPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEVSKKQRKKE :::: ::::::::::::::::::::::::::::::::::::::::::::::..::::::: gi|123 TPWGSKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEEIAKKQRKKE 40 50 60 70 80 90 400 410 420 430 440 450 KIAA18 KPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQRE ::::::. ::::.::::.:.:::.::::.::::::::.:::::::::.:::::::::::: gi|123 KPKKFTKPPKKQLSSPCSQKKEKTLEKSTSRDVSPFVVSMQKNKWDASRSLRFNQDAQRE 100 110 120 130 140 150 460 470 480 490 500 510 KIAA18 DDQRRMTEITGHLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKN ::::::.::::::::::::::::::.::.::::::::::::::..:::::.:::.::.:: gi|123 DDQRRMSEITGHLIKMRLGDLDRVKAKESKEFAGGIYSRLEAQVRASVPVTARQNSSDKN 160 170 180 190 200 210 520 KIAA18 TRSKSRFGQGRPA : gi|123 QR >>gi|12832467|dbj|BAB22119.1| unnamed protein product [M (183 aa) initn: 1096 init1: 1096 opt: 1096 Z-score: 1220.4 bits: 233.9 E(): 2.8e-59 Smith-Waterman score: 1096; 89.071% identity (98.907% similar) in 183 aa overlap (341-523:1-183) 320 330 340 350 360 370 KIAA18 VGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSE :::::::::::::::::::::::::::::: gi|128 NAFLSLKNWTLQLKQQSLFSEEEEYTTGSE 10 20 30 380 390 400 410 420 430 KIAA18 VTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSM :::::::::::..:::::::::::::. ::::.::::.:.:::.::::.::::::::.:: gi|128 VTEDEVGDEEEIAKKQRKKEKPKKFTKPPKKQLSSPCSQKKEKTLEKSTSRDVSPFVVSM 40 50 60 70 80 90 440 450 460 470 480 490 KIAA18 QKNKWDATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKEFAGGIYSRL :::::::.::::::::::::::::::.::::::::::::::::::.::.::::::::::: gi|128 QKNKWDASRSLRFNQDAQREDDQRRMSEITGHLIKMRLGDLDRVKAKESKEFAGGIYSRL 100 110 120 130 140 150 500 510 520 KIAA18 EAQIKASVPVSARQSSSEKNTRSKSRFGQGRPA :::..:::::.:::.::.:: :::::::::::: gi|128 EAQVRASVPVTARQNSSDKNQRSKSRFGQGRPA 160 170 180 >>gi|47077022|dbj|BAD18445.1| unnamed protein product [H (379 aa) initn: 1073 init1: 1073 opt: 1079 Z-score: 1197.6 bits: 230.8 E(): 5.3e-58 Smith-Waterman score: 1079; 95.758% identity (97.576% similar) in 165 aa overlap (11-175:206-370) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTKENKDCEMPTLEPGNVISILISS :.:::::::::::::::::::::::::::: gi|470 FAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENKDCEMPTLEPGNVISILISS 180 190 200 210 220 230 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF 240 250 260 270 280 290 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG 300 310 320 330 340 350 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ :::::::: . .: gi|470 NIVYIHIRCREDKIHTCIFVYIYI 360 370 >>gi|156219005|gb|EDO39893.1| predicted protein [Nematos (306 aa) initn: 1011 init1: 898 opt: 1004 Z-score: 1115.8 bits: 215.3 E(): 1.9e-53 Smith-Waterman score: 1004; 53.414% identity (83.133% similar) in 249 aa overlap (11-256:60-304) 10 20 30 KIAA18 LRNSGLSYCSKFIKRNTKENK---DCEMPTLEPGNVISIL :..:.. :. : . : :::.:::::: gi|156 FAEYLSVEAQRWEEVDISVHCDVQIFDWLMKYVKKGLMEKGKKVDEKPPKLEPNNVISIL 30 40 50 60 70 80 40 50 60 70 80 90 KIAA18 ISSEFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKK :::.:::::.::..::..::.::.:::.::::::::: .:.:::..::.:::.:..::.: gi|156 ISSDFLKMDNLVNDCISFCHENMSAIVSTPCNMNCINDKLVTRISELFNHNELDEVKDRK 90 100 110 120 130 140 100 110 120 130 140 150 KIAA18 DKFKSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVD :::::::::::::.::::. . : ..: :.::: :..:.:.:...:. : .....: gi|156 DKFKSKLFCKKIEELFDPNKTTICSPASACTMYRCSACHRLITQESQERLRCALSRMTID 150 160 170 180 190 200 160 170 180 190 200 210 KIAA18 RRGNIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFS .:: ... :.:: .:::.::...: :..::::::::::::..: : : :: . : : :.. gi|156 HRGRVTFSHVRDPNWDVNEYIQGLREKFKSWRDVYWRLWGSVNILYCYRCGEYFPCCELG 210 220 230 240 250 260 220 230 240 250 260 270 KIAA18 HCQYHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEG ::.::. .. . . ... .:.::::.:.:: :::: gi|156 HCRYHTSSADFGSHKGTI----VGVYPCCQQRVLPFDPTGQ 270 280 290 300 280 290 300 310 320 330 KIAA18 GDLPSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKT >>gi|210114052|gb|EEA61815.1| hypothetical protein BRAFL (546 aa) initn: 1424 init1: 611 opt: 962 Z-score: 1066.1 bits: 207.0 E(): 1.1e-50 Smith-Waterman score: 1434; 42.570% identity (73.494% similar) in 498 aa overlap (11-498:66-546) 10 20 30 40 KIAA18 LRNSGLSYCSKFIKRNTKENKDCEMPTLEPGNVISILISS ...:::. ..:: : : :::.::::::::: gi|210 FAEYLSTDAQRWEEVDISVHCDVHIFDWLMRYVKRNSPREKDKETPKLEPNNVISILISS 40 50 60 70 80 90 50 60 70 80 90 100 KIAA18 EFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLFSHNEVDDLKDKKDKF .:::: .:::.::.:::.::.:::.::::::::. :.:::: :.:::.:..::.:::. gi|210 DFLKMATLVEECIEYCHQNMSAIVSTPCNMNCISDPLITRIAATFDHNEADEIKDRKDKI 100 110 120 130 140 150 110 120 130 140 150 160 KIAA18 KSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKINVDRRG :::.:::::: :: :.:..::.:: .::..::.. . .: :.: ..... .: gi|210 KSKIFCKKIESLF---------RNNGVTLFRCHVCKRVLTQDMQMKIKCFPTRMSINSHG 160 170 180 190 200 170 180 190 200 210 220 KIAA18 NIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQ :.: : : .:::.... .. .:::.:::::::::: ...: :::: ..: :.:.:::: gi|210 AIAYRHSPDPNWDVNDFIINMHNELKAWRDVYWRLWGMLHYLQCSRCKKVFPCVELSHCQ 210 220 230 240 250 260 230 240 250 260 270 280 KIAA18 YHSETVVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDL .: : :: ... :. :..:.: :::.:..::::. :..::..:::.:.. .. :.: gi|210 FHMEQPQYPPSGDELSMVAVGVYACCNSKAMRFDPSGLNNGCRTRDHVVNFSSNKPGADQ 270 280 290 300 310 320 290 300 310 320 330 KIAA18 PSCPTARMLDDLHKYRDVIVVPFSKDTVSDVGVGLCDEKGIECDV--LLEPNTPWGPKTG :. :.:.:: ..:.. :::. .: . .. . ..: .. : . .. .. gi|210 EE-PADRVLEDLLLHKDAVCVPFKPSTRESRSLETLAQVSMETETEHTLSVKPVYSDHSR 330 340 350 360 370 380 340 350 360 370 380 390 KIAA18 ELNAFLSLKNWTLQLKQQSLFSEEEEYTTGSEVTEDEVGDEEE--------VSKKQRKKE . :.: :. .:: : :. ..: ..:: .::::: :. . :: . gi|210 DCNSFYFLNPQSLQCIIQRAFTPDNESVNGS---DDEVGDSEQPRTSLPRVIVKKGGNVV 390 400 410 420 430 440 400 410 420 430 440 450 KIAA18 KPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKWDATRSLRFNQDAQRE . .: ... :... : :::.:. : . . . ... :::.:::::.::::::: gi|210 QTSKTAQSDKNKARVKCLGTKEKSLKMSCVKGFGMRIKVQRSWKWDTTRSLRWNQDAQRE 450 460 470 480 490 500 460 470 480 490 500 510 KIAA18 DDQRRMTEITGHLIKMRLGDLDRVKSKEAKEFAGGIYSRLEAQIKASVPVSARQSSSEKN .: : ......: :...: :...: ::.::::::.:.::..... gi|210 EDAMRNSDMVSQLAKIHFGTLEKTK----KEYAGGIYSKLDAQFRSTL 510 520 530 540 520 KIAA18 TRSKSRFGQGRPA 523 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 22:05:02 2009 done: Thu Mar 5 22:08:57 2009 Total Scan time: 1483.260 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]