hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-13520523/chunk_1/iprscan-20080502-13520523.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1825 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01657 P-ATPase-V: P-type ATPase of unknown pu 2157.5 0 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 296.5 1.7e-86 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01657 1/1 84 1173 .. 1 1350 [] 2157.5 0 TIGR01494 1/6 267 361 .. 1 94 [. 62.3 1.4e-16 TIGR01494 2/6 444 547 .. 137 232 .. 76.2 3.1e-20 TIGR01494 5/6 832 884 .. 362 414 .. 76.0 3.4e-20 Alignments of top-scoring domains: TIGR01657: domain 1 of 1, from 84 to 1173: score 2157.5, E = 0 *->dktigisaYktspfkliiylvtlvltlgLvlLlltWkpewkvKltyv ++++++s+++++p++++++l+t++l+++L++L+++W+++++++lt++ KIAA1825 84 GCWGWGSSWVQIPEAALLVLATICLAHALTVLSGHWSVHAHCALTCT 130 pvsnedaetvvivtpdevksWqlFevqvtvlsgsdeivelsnkslsndle p+++++++t+v+v+p t+++gs+e+v+l++ KIAA1825 131 PEYDPSKATFVKVVP-------------TPNNGSTELVALHR-------- 159 lenaveageepiyfdfrkqrfsyeekeqkqkRvLryFeyrsvkyifsplp n++e+g+e+++f+f+k+++sy+++e+k +f p++ KIAA1825 160 --NEGEDGLEVLSFEFQKIKYSYDALEKK---------------QFLPVA 192 ylfkelsnLdfgdyskcagesnfGLttgeiakrkalYGkNeieipvpsfl ++++++ f++y++++g+++ ++ei+++++++G+N++e++vp+f+ KIAA1825 193 FPVGNA----FSYYQSNRGFQE----DSEIRAAEKKFGSNKAEMVVPDFS 234 eLLkeEvlaPFYvFQvFSViLWllDEYyYYalcivfmsvlsivlsvyqir eL+ke+++aPF+vFQvF+V+LW+lDEY+YY++++++m+v++++++v+q++ KIAA1825 235 ELFKERATAPFFVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQM 284 kqlqeLrdmvhkptqsVeViRnggQGYkwetiaSdeLVPGDivsiprptq ++++e+r+m++kp ++++V+R++ kw++iaSde+VPGDivsi+r++ KIAA1825 285 RNMSEIRKMGNKP-HMIQVYRSR----KWRPIASDEIVPGDIVSIGRSP- 328 tGaeeklmPcDavLLsGsCIVNESmLTGESVPvlKvplpdesvdvegddd +e+l+PcD++LL+G+CIV+E+mLTGESVP++K+p++d ++d KIAA1825 329 ---QENLVPCDVLLLRGRCIVDEAMLTGESVPQMKEPIED------LSPD 369 eklqlketskkHvLFgGTkvLQirpypgksdslkppdtgvlAiVvRTGFs ++l+l+++s+ Hv+FgGTkv+Q++p+++++++lkp+d+g++A+V+RTGF+ KIAA1825 370 RVLDLQADSRLHVIFGGTKVVQHIPPQKATTGLKPVDSGCVAYVLRTGFN 419 TsKGqLvRsiLYPkprvfkfykdsfkFilfLavlAliGfiYviielikng Ts+G+L+R+iL++++rv+++++++f+FilfL+v+A+++++Yv+ie++k++ KIAA1825 420 TSQGKLLRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWIEGTKDP 469 srskgkiiLrsLDIiTivVPPaLPaaLsvginnaLaRLkkkgIfCisPfR sr+++k++L++++I+T+vVPP+LP++Ls+++n++L++L+k +++C++PfR KIAA1825 470 SRNRYKLFLECTLILTSVVPPELPIELSLAVNTSLIALAKLYMYCTEPFR 519 InfAGkidvvCFDKTGTLTEDgLdlrGVqglsgnqereikkvkLlkdiRq I+fAGk++v+CFDKTGTLT+D+L++rGV+gl++++e KIAA1825 520 IPFAGKVEVCCFDKTGTLTSDSLVVRGVAGLRDGKE-------------- 555 vFlkivtedsssldslvpsetvkalAtCHsLtkleggkLvGDPLDlkmfe vt++s ++p+et++alA+CHsL++l++g+LvGDPL+++m++ KIAA1825 556 -----VTPVS-----SIPVETHRALASCHSLMQLDDGTLVGDPLEKAMLT 595 atgWtleedFqKRAFHSLYEGReeddesalptsilpaVvrPpkqLLPlse a++Wtl++ de+++p+si+ KIAA1825 596 AVDWTLTK-----------------DEKVFPRSIK--------------- 613 pNrelkltddppsqelsiirrFeFsSaLqRMSVivstnderspdfklmaf + q+l+i++rF+F+SaL+RMSV++s+++ +s+d++++a+ KIAA1825 614 -----------T-QGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAA 651 vKGAPEtIqslcspetVPsdyqevlksytreGyRViAlAsKeLptkltlq vKGAPEt++s++s ++P+dy++++++++reG+RV+Al++KeL+ +lt+q KIAA1825 652 VKGAPETLHSMFS--QCPPDYHHIHTEISREGARVLALGYKELG-HLTHQ 698 kaqdlsRdavEsnLtFlGfiVfenpLKpdTkeVIkeLkrAniRtvMiTGD +a++++R+a+E++L+F+GfiV+++pLK+d+k+VI+e+++A++R+vMiTGD KIAA1825 699 QAREVKREALECSLKFVGFIVVSCPLKADSKAVIREIQNASHRVVMITGD 748 NlLTAvsVArecGivepsnvlilaeaeppesgkpaqikfevidsnsssdE N+LTA++VA+e++++e++++lil+++ s+k++q+++++id+ KIAA1825 749 NPLTACHVAQELHFIEKAHTLILQPP----SEKGRQCEWRSIDG------ 788 viEDDAsvsismCsstWKGssEtqvipiastqveiPvklgkdSyledlla +++ P+++g ++++la KIAA1825 789 -------------------------------SIVLPLARG----SPKALA 803 sryhLAlsGkafavLqahsptdhiSFKPEWVKmQDKSVQKIIelllkLll +y+L+l+G+++a+Lqa++p ++ll+L++ KIAA1825 804 LEYALCLTGDGLAHLQATDP----------------------QQLLRLIP 831 httVFARmaPdQKetlvelLqkldYtVgMCGDGANDCGALKqADVGISLs h++VFAR+aP+QKe+++++L++l+Y+++MCGDG+ND+GALK+ADVG++L+ KIAA1825 832 HVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGVALL 881 eakepkklserrrreGmKmmYikdkeklsnsPlepvsktikqlfePGPKn ++ +p++++errrr+ +d+++lsns+++++s+t+kq KIAA1825 882 AN-APERVVERRRRP-------RDSPTLSNSGIRATSRTAKQ-------- 915 PHYLKALessktkipPeerkateeeLqrkklakvlsdLeneeGDarsaPl +s ++pP+e+++t+ qr++l++vl+dLe+e s+P+ KIAA1825 916 --------RS--GLPPSEEQPTS---QRDRLSQVLRDLEDE-----STPI 947 vKLGeASvAAPFTSKlaSIsCVpnVIrEGRcaLvTSfqmFKymaLysLiq vKLG+AS+AAPFTSKl+SI+C+++VI++GRc+LvT++qmFK++aL++Li KIAA1825 948 VKLGDASIAAPFTSKLSSIQCICHVIKQGRCTLVTTLQMFKILALNALIL 997 fysvsiLYligsnlgDgQFltidLllGifvvallmSrnkPlkkLskeRPp +ys+s+LYl+g++++D+Q +t+++ll +++++l++Sr+kPlk+Ls+eRP KIAA1825 998 AYSQSVLYLEGVKFSDFQ-ATLQGLL-LAGCFLFISRSKPLKTLSRERPL 1045 snLfSvylltSvliQfvlhilsqvylvfelhkqpwykpeepkDArnttGG +n+f++y++++v++Qf++h+ls+vyl++e+++++++k+e++ KIAA1825 1046 PNIFNLYTILTVMLQFFVHFLSLVYLYREAQARSPEKQEQF--------- 1086 FWnsHvDnlvdlekenvpsleNTvlFfvSsfqYlitaivnskGpPFrepl vdl+ke++psl+N+++++++++++++t+++n+kGpPF+e+l KIAA1825 1087 ---------VDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESL 1127 ykNkpfvysllGLIYtillaiillllldesphlgrilqivplpqeFrskL ++Nkp+v+sl+ + +l++i++lll++sp++++++++v++p+eF kL KIAA1825 1128 PENKPLVWSLA----V-SLLAIIGLLLGSSPDFNSQFGLVDIPVEF--KL 1170 lia<-* +ia KIAA1825 1171 VIA 1173 TIGR01494: domain 1 of 6, from 267 to 361: score 62.3, E = 1.4e-16 *->viliivllfvlletlqkeaaedalrslkdkelnpqkvtvlrnggvei ++l+++++f++ + q + + +r++ +k + q+++ ++ + i KIAA1825 267 FTLSMLVAFEASLVQQQMRNMSEIRKMGNKPHMIQVYRSRK--WRPI 311 sskdlvvGDiVlv...kkGdivPADgvLLsgscyVdessLTGEsnpvlKt s+++v+GDiV+++++++ + vP+D++LL+g c+Vde++LTGEs+p K+ KIAA1825 312 ASDEIVPGDIVSIgrsPQENLVPCDVLLLRGRCIVDEAMLTGESVPQMKE 361 <-* KIAA1825 - - TIGR01494: domain 2 of 6, from 444 to 547: score 76.2, E = 3.1e-20 *->fifilfllllalsvflltligl.....wtffkiflralillviaiPi fifilfll++a++++++++i+++++++++ +k fl + ++l++++P+ KIAA1825 444 FIFILFLLVFAIAAAAYVWIEGtkdpsRNRYKLFLECTLILTSVVPP 490 aLpvavtial...avgdkrmailvrslnalEelGqvdyicsDKTGTLTen Lp+ +++a+++++++ ++++++++++++++++G+v+++c+DKTGTLT + KIAA1825 491 ELPIELSLAVntsLIALAKLYMYCTEPFRIPFAGKVEVCCFDKTGTLTSD 540 kmtfkkv<-* + +++v KIAA1825 541 SLVVRGV 547 TIGR01494: domain 5 of 6, from 832 to 884: score 76.0, E = 3.4e-20 *->ecglfARvsPeqKaeiVellqkrgaiVamiGDGaNDapALkaADVGi ++++fARv+P qK +++ l++ g++++m+GDG+ND++ALk ADVG+ KIAA1825 832 HVQVFARVAPKQKEFVITSLKELGYVTLMCGDGTNDVGALKHADVGV 878 aigAka<-* a+ A a KIAA1825 879 ALLANA 884 //