hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13465475/chunk_1/iprscan-20080502-13465475.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1822
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00202                                                 172.7    3.7e-47   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00202    1/1     424   527 ..     1   118 []   172.7  3.7e-47

Alignments of top-scoring domains:
SM00202: domain 1 of 1, from 424 to 527: score 172.7, E = 3.7e-47
                   *->vRLvgGgs..pcEGRVEVyhnGgGqgqWGTVCDdgWdlrdAnVVCRQ
                      vRLv   + ++++GRVEV+ +G    +WGTVCDd+W++  A VVCRQ
    KIAA1822   424    VRLVRPAGlsSGSGRVEVFVGG----RWGTVCDDSWNISGAAVVCRQ 466  

                   LGfggavsasgllpAssayfgpgsg.pIwldnVrCtGtEssLsdCphsgw
                   LGf +av+a++     +a fg+g+  pI+ld+VrC G E +L +C+h+g+
    KIAA1822   467 LGFAYAVRAVK-----RAEFGQGGSlPILLDDVRCAGWERNLLECQHNGV 511  

                   gvhnttCsHggdRnrseDAGVvCs<-*
                   g hn  C H      +eDAGVvCs   
    KIAA1822   512 GTHN--CEH------DEDAGVVCS    527  

//