hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13465475/chunk_1/iprscan-20080502-13465475.nocrc
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Query sequence: KIAA1822
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00530.9.fs Scavenger receptor cysteine-rich domain         94.4    4.1e-26   1
PF00530.9.ls Scavenger receptor cysteine-rich domain         96.3    8.7e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00530.9.fs   1/1     429   527 ..     1   113 []    94.4  4.1e-26
PF00530.9.ls   1/1     429   527 ..     1   113 []    96.3  8.7e-26

Alignments of top-scoring domains:
PF00530.9.fs: domain 1 of 1, from 429 to 527: score 94.4, E = 4.1e-26
                   *->vgGssrCeGrVEVrhdgskWgtVCdssWslrdanvdpQaskvCrqLG
                      + G s  +GrVEV+  g +WgtVCd+sW+ + a v      vCrqLG
    KIAA1822   429    PAGLSSGSGRVEVFVGG-RWGTVCDDSWNISGAAV------VCRQLG 468  

                   CGgavsll.gpyfsegg.gPagqreiwldgvnCsGnEtsLsqCpvrvtpp
                   +  av ++++++f++gg+ P     i ld v C G E  L +C++     
    KIAA1822   469 FAYAVRAVkRAEFGQGGsLP-----ILLDDVRCAGWERNLLECQHN---G 510  

                   glsrqcshdgedagVvCs<-*
                    + ++c h +edagVvCs   
    KIAA1822   511 VGTHNCEH-DEDAGVVCS    527  

PF00530.9.ls: domain 1 of 1, from 429 to 527: score 96.3, E = 8.7e-26
                   *->vgGssrCeGrVEVrhdgskWgtVCdssWslrdanvdpQaskvCrqLG
                      + G s  +GrVEV+  g +WgtVCd+sW+ + a v      vCrqLG
    KIAA1822   429    PAGLSSGSGRVEVFVGG-RWGTVCDDSWNISGAAV------VCRQLG 468  

                   CGgavsll.gpyfsegg.gPagqreiwldgvnCsGnEtsLsqCpvrvtpp
                   +  av ++++++f++gg+ P     i ld v C G E  L +C++     
    KIAA1822   469 FAYAVRAVkRAEFGQGGsLP-----ILLDDVRCAGWERNLLECQHN---G 510  

                   glsrqcshdgedagVvCs<-*
                    + ++c h +edagVvCs   
    KIAA1822   511 VGTHNCEH-DEDAGVVCS    527  

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