hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13345085/chunk_1/iprscan-20080502-13345085.nocrc
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Query sequence: KIAA1815
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF04389.7.fs  Peptidase family M28                      244.9    1.7e-72   1
PF04389.7.ls  Peptidase family M28                      246.6    4.7e-71   1
PF01546.18.ls Peptidase family M20/M25/M40               -3.2     0.0023   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF04389.7.fs    1/1     175   346 ..     1   225 []   244.9  1.7e-72
PF04389.7.ls    1/1     175   346 ..     1   225 []   246.6  4.7e-71
PF01546.18.ls   1/1     178   354 ..     1   280 []    -3.2   0.0023

Alignments of top-scoring domains:
PF04389.7.fs: domain 1 of 1, from 175 to 346: score 244.9, E = 1.7e-72
                   *->eylllgAHyDSvpvgkdapgdsgeigpGAtDnAsGvAalLElARvLa
                      + +l ++H+DSv             +pGA D+A+ ++++LE++RvL 
    KIAA1815   175    HAVLANCHFDSVA-----------NSPGASDDAVSCSVMLEVLRVLS 210  

                   aqqgpqpekrsvvFlffgAEEAfeeWpdGLlGShafaekWelPphkplkk
                   + +   +  + v+Flf+gAEE      + L++Sh+f+    + +h++++ 
    KIAA1815   211 T-SSEAL-HHAVIFLFNGAEE------NVLQASHGFI----T-QHPWASL 247  

                   iraviNLDmiGsggpallfqdggTanafgnlpsIErLllllleaylesaa
                   ira+iNL+++G gg++l fq+g+      ++p+     l  ++ay ++a+
    KIAA1815   248 IRAFINLEAAGVGGKELVFQTGP------ENPW-----L--VQAYVSAAK 284  

                   hpygttlgldvfqegggpgrsDhapFlndkaGvPgLdfaagpnkdgqaag
                   hp++++++++vfq+g +p+++D+++++ d +++Pg+d+a+ +n       
    KIAA1815   285 HPFASVVAQEVFQSGIIPSDTDFRIYR-DFGNIPGIDLAFIEN------- 326  

                   ggtagdafgpvYHTpaDtldnidldtlq<-*
                           g+ YHT++Dt+d+i  d++q   
    KIAA1815   327 --------GYIYHTKYDTADRILTDSIQ    346  

PF04389.7.ls: domain 1 of 1, from 175 to 346: score 246.6, E = 4.7e-71
                   *->eylllgAHyDSvpvgkdapgdsgeigpGAtDnAsGvAalLElARvLa
                      + +l ++H+DSv             +pGA D+A+ ++++LE++RvL 
    KIAA1815   175    HAVLANCHFDSVA-----------NSPGASDDAVSCSVMLEVLRVLS 210  

                   aqqgpqpekrsvvFlffgAEEAfeeWpdGLlGShafaekWelPphkplkk
                   + +   +  + v+Flf+gAEE      + L++Sh+f+    + +h++++ 
    KIAA1815   211 T-SSEAL-HHAVIFLFNGAEE------NVLQASHGFI----T-QHPWASL 247  

                   iraviNLDmiGsggpallfqdggTanafgnlpsIErLllllleaylesaa
                   ira+iNL+++G gg++l fq+g+      ++p+     l  ++ay ++a+
    KIAA1815   248 IRAFINLEAAGVGGKELVFQTGP------ENPW-----L--VQAYVSAAK 284  

                   hpygttlgldvfqegggpgrsDhapFlndkaGvPgLdfaagpnkdgqaag
                   hp++++++++vfq+g +p+++D+++++ d +++Pg+d+a+ +n       
    KIAA1815   285 HPFASVVAQEVFQSGIIPSDTDFRIYR-DFGNIPGIDLAFIEN------- 326  

                   ggtagdafgpvYHTpaDtldnidldtlq<-*
                           g+ YHT++Dt+d+i  d++q   
    KIAA1815   327 --------GYIYHTKYDTADRILTDSIQ    346  

PF01546.18.ls: domain 1 of 1, from 178 to 354: score -3.2, E = 0.0023
                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   *->llraHmDvVPiqEdetgwrpyaStfdPFlvekdgrWddsPFpteegG
                      l + H+D V                                      
    KIAA1815   178    LANCHFDSVA------------------------------------- 187  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   vpGvprigrmhgrGhdDhkggllaalealaalkaaggklkgtvkllfqpd
                   +           +G+ D+  +   +le+l+ l  + + l++ v++lf ++
    KIAA1815   188 N----------SPGASDDAVSCSVMLEVLRVLSTSSEALHHAVIFLFNGA 227  

                RF xxxx   xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   EEgg...gfglaallgskeaglgkadveliGaramiedGsleALrGyhad
                   EE   + ++g+                      +++              
    KIAA1815   228 EENVlqaSHGFI------------------TQHPWASL------------ 247  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  
                   dpagveGalefgvdaifglHvwpdlgvvGEptgrpgvlagvVtvhivg..
                                         + + + +E +g  g            + 
    KIAA1815   248 ----------------------IRAFINLEAAGVGG---------KELvf 266  

                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   xxxxxxx
                   ...tvndplvaalrealakelglgeenvvdgpepepsggg...eDaaffa
                    ++++n+ lv+a  +a ak  ++ +  v +  e+  sg  ++++D+++++
    KIAA1815   267 qtgPENPWLVQAYVSA-AK--HPFASVVAQ--EVFQSGIIpsdTDFRIYR 311  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   
                   ekvpglgfpmlgvGpgdlaHspnEyvdeddlekgaevlarllee<-*
                    +  ++g++  ++ +g++ H+ ++++ ++ l   ++   + +++   
    KIAA1815   312 DFGNIPGIDLAFIENGYIYHT-KYDTADRILTDSIQRAGDNILA    354  

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