hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13261532/chunk_1/iprscan-20080502-13261532.nocrc
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Query sequence: KIAA1810
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           45.3    1.9e-15   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           47.1    5.6e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     254   292 ..     1    50 []    45.3  1.9e-15
PF00097.15.ls   1/1     254   292 ..     1    50 []    47.1  5.6e-11

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 254 to 292: score 45.3, E = 1.9e-15
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C IC+ee+ +        lpC+H      f+ sCl++w++  +++tC
    KIAA1810   254    CIICREEMVTGA----KRLPCNHI-----FHTSCLRSWFQ--RQQTC 289  

                   plC<-*
                   p C   
    KIAA1810   290 PTC    292  

PF00097.15.ls: domain 1 of 1, from 254 to 292: score 47.1, E = 5.6e-11
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C IC+ee+ +        lpC+H      f+ sCl++w++  +++tC
    KIAA1810   254    CIICREEMVTGA----KRLPCNHI-----FHTSCLRSWFQ--RQQTC 289  

                   plC<-*
                   p C   
    KIAA1810   290 PTC    292  

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