hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13105951/chunk_1/iprscan-20080502-13105951.nocrc
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Query sequence: KIAA1801
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                  30.1    0.00031   4

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/4     751   773 ..     1    24 []     8.8       35
SM00369     2/4     859   881 ..     1    24 []     1.0  3.1e+02
SM00369     3/4     925   946 ..     1    24 []    14.0      8.1
SM00369     4/4     971   994 ..     1    24 []     6.3       71

Alignments of top-scoring domains:
SM00369: domain 1 of 4, from 751 to 773: score 8.8, E = 35
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL +  L+ NqLtsL+ g+ ++   
    KIAA1801   751    LENLCVVLLNKNQLTSLH-GLDGC    773  

SM00369: domain 2 of 4, from 859 to 881: score 1.0, E = 3.1e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL+ L L++NqL     g+++    
    KIAA1801   859    LKNLQQLILDHNQLINTK-GLCDT    881  

SM00369: domain 3 of 4, from 925 to 946: score 14.0, E = 8.1
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+ LreL+L++N ++++  +aF++   
    KIAA1801   925    LVLLRELHLDDNSISTV--EAFSS    946  

SM00369: domain 4 of 4, from 971 to 994: score 6.3, E = 71
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       ++L++Ld s+N L+ L + + +    
    KIAA1801   971    FVSLEKLDVSHNCLSDLKSAIKWF    994  

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