hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12421523/chunk_1/iprscan-20080502-12421523.nocrc
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Query sequence: KIAA1784
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  35.0      1e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      24   127 ..     1   114 []    35.0    1e-05

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 24 to 127: score 35.0, E = 1e-05
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      +Dv ++ +         g+ ++a  Hk+vL a+   +p +    +++
    KIAA1784    24    SDVQFQTDS--------GEVLYA--HKFVLYAR---CPLLIQYVNNe 57   

                   .............ieldDeallievspeaFralLnflYt.kldlpeedve
                   + +  +++  ++++ l D      vs ea r++L++lYt +  lp+    
    KIAA1784    58 gfsavedgvltqrVLLGD------VSTEAARTFLHYLYTaDTGLPPG--- 98   

                   nveelLelAdfldSYGqip.lvelCeefllknl<-*
                      el  lA+++    ++ +lv+lCe+  + +    
    KIAA1784    99 LSSELSSLAHRF----GVSeLVHLCEQVPIATD    127  

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