hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12320481/chunk_1/iprscan-20080502-12320481.nocrc
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Query sequence: KIAA1778
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  26.6     0.0035   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      50   153 ..     1   114 []    26.6   0.0035

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 50 to 153: score 26.6, E = 0.0035
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                        v l+vgg         + + +   +++  +   +++ +  +f+ +
    KIAA1778    50    DIVELNVGG---------QVYVT--RRCTVVSV--PDSLLWRMFTQq 83   

                   ...........ieldDeallievspeaFralLnflYt.kldlpeedvenv
                   ++++  +++++ ++ D      ++   Fr +L++l++ +l lp+  + + 
    KIAA1778    84 qpqelardskgRFFLD------RDGFLFRYILDYLRDlQLVLPDY-FPER 126  

                   eelLelAdfldSYGqip.lvelCeefllknl<-*
                     l ++A+++    ++p+lv+      +      
    KIAA1778   127 SRLQREAEYF----ELPeLVRRLGAPQQPGP    153  

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