# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/af00171.fasta.nr -Q ../query/KIAA1769.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA1769, 2114 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7824276 sequences
  Expectation_n fit: rho(ln(x))= 5.3923+/-0.000189; mu= 16.1543+/- 0.011
 mean_var=85.5030+/-16.782, 0's: 34 Z-trim: 51  B-trim: 3494 in 2/65
 Lambda= 0.138702

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 43, opt: 31, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|21668026|gb|AAM74197.1|AF517673_1 peroxisomal p (2080) 14119 2836.7       0
gi|119595661|gb|EAW75255.1| peroxisomal proliferat (2080) 14106 2834.1       0
gi|66347335|emb|CAI95749.1| peroxisomal proliferat (2080) 14093 2831.5       0
gi|209572784|sp|Q9BYK8.5|PR285_HUMAN RecName: Full (2649) 14073 2827.6       0
gi|156105693|ref|NP_001032412.2| PPAR-alpha intera (2649) 14060 2825.0       0
gi|78126069|dbj|BAE46995.1| PPAR gamma DBD-interac (2649) 14052 2823.4       0
gi|73992747|ref|XP_543098.2| PREDICTED: similar to (2932) 10160 2044.6       0
gi|119595663|gb|EAW75257.1| peroxisomal proliferat (2542) 8603 1733.0       0
gi|18676690|dbj|BAB84997.1| FLJ00244 protein [Homo (1124) 7675 1547.0       0
gi|109469346|ref|XP_230961.4| PREDICTED: similar t (2885) 7391 1490.5       0
gi|149033955|gb|EDL88738.1| rCG38503, isoform CRA_ (1672) 5037 1019.3       0
gi|148675452|gb|EDL07399.1| mCG23072, isoform CRA_ (2547) 5023 1016.6       0
gi|168984368|emb|CAM23416.2| novel protein, possib (2903) 4156 843.2       0
gi|12698198|dbj|BAB21926.1| hypothetical protein [ ( 545) 3182 647.7 9.7e-183
gi|194224644|ref|XP_001492862.2| PREDICTED: simila (2963) 2860 583.9 8.6e-163
gi|16550383|dbj|BAB70969.1| unnamed protein produc ( 413) 2755 562.1 4.1e-157
gi|149033954|gb|EDL88737.1| rCG38503, isoform CRA_ (2745) 2658 543.4 1.2e-150
gi|13904994|gb|AAH06779.1| BC006779 protein [Mus m ( 717) 2610 533.3 3.4e-148
gi|74192134|dbj|BAE34274.1| unnamed protein produc (1754) 2118 435.2 2.9e-118
gi|148675453|gb|EDL07400.1| mCG23072, isoform CRA_ (2722) 2118 435.3  4e-118
gi|125347767|ref|NP_898985.2| hypothetical protein (2947) 2118 435.4 4.2e-118
gi|123232788|emb|CAM23414.1| novel protein, possib (2970) 2118 435.4 4.3e-118
gi|222424984|dbj|BAH20441.1| PPAR gamma-DNA-bindin (2947) 2113 434.4 8.5e-118
gi|126302999|ref|XP_001376033.1| PREDICTED: simila (2843) 1809 373.5 1.7e-99
gi|118100744|ref|XP_417438.2| PREDICTED: similar t (2818) 1695 350.7 1.2e-92
gi|126303276|ref|XP_001378700.1| PREDICTED: hypoth (1260) 1425 296.4 1.2e-76
gi|20270921|gb|AAM18477.1|AF483538_1 VHSV-induced  ( 440) 1413 293.6   3e-76
gi|115891592|ref|XP_791308.2| PREDICTED: similar t (3690) 1384 288.6 8.2e-74
gi|115954252|ref|XP_001175770.1| PREDICTED: simila (3748) 1384 288.6 8.3e-74
gi|189520870|ref|XP_001919692.1| PREDICTED: simila (2367) 1219 255.4 5.1e-64
gi|125806827|ref|XP_699251.2| PREDICTED: similar t (2781) 1210 253.7   2e-63
gi|30851520|gb|AAH52532.1| BC006779 protein [Mus m ( 230) 1186 247.9 8.7e-63
gi|115712839|ref|XP_784320.2| PREDICTED: similar t (3249) 1108 233.3 3.2e-57
gi|47209162|emb|CAF90337.1| unnamed protein produc (2483) 1070 225.6   5e-55
gi|115717851|ref|XP_001178308.1| PREDICTED: simila (3256) 1059 223.5 2.8e-54
gi|210131706|gb|EEA79374.1| hypothetical protein B (3500) 1053 222.3 6.9e-54
gi|210114578|gb|EEA62337.1| hypothetical protein B ( 406)  972 205.3   1e-49
gi|210114506|gb|EEA62265.1| hypothetical protein B ( 402)  962 203.3 4.1e-49
gi|210131094|gb|EEA78764.1| hypothetical protein B (1062)  941 199.5 1.6e-47
gi|210126185|gb|EEA73873.1| hypothetical protein B (1881)  935 198.5 5.5e-47
gi|45445895|gb|AAS65008.1| CG9425, isoform B [Dros (2103)  928 197.1 1.6e-46
gi|212508927|gb|EEB12468.1| helicase with zinc fin (1766)  924 196.3 2.4e-46
gi|167863148|gb|EDS26531.1| helicase with zinc fin (2054)  893 190.1   2e-44
gi|210116000|gb|EEA63747.1| hypothetical protein B ( 409)  884 187.7 2.1e-44
gi|91078472|ref|XP_968116.1| PREDICTED: similar to (1419)  851 181.6 5.1e-42
gi|156209788|gb|EDO31025.1| predicted protein [Nem ( 313)  788 168.4   1e-38
gi|82185991|sp|Q6NYU2.1|HELZ_DANRE RecName: Full=P (1860)  789 169.3 3.4e-38
gi|171846398|gb|AAI61631.1| Helz protein [Xenopus  (1742)  781 167.6 9.9e-38
gi|194155160|gb|EDW70344.1| GJ13732 [Drosophila vi (2091)  780 167.5 1.3e-37
gi|115653102|ref|XP_780726.2| PREDICTED: similar t (1219)  776 166.5 1.5e-37


>>gi|21668026|gb|AAM74197.1|AF517673_1 peroxisomal proli  (2080 aa)
 initn: 14119 init1: 14119 opt: 14119  Z-score: 15257.1  bits: 2836.7 E():    0
Smith-Waterman score: 14119;  100.000% identity (100.000% similar) in 2080 aa overlap (35-2114:1-2080)

           10        20        30        40        50        60    
KIAA17 SQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                     ::::::::::::::::::::::::::::::
gi|216                               MSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                             10        20        30

           70        80        90       100       110       120    
KIAA17 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
               40        50        60        70        80        90

          130       140       150       160       170       180    
KIAA17 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
              100       110       120       130       140       150

          190       200       210       220       230       240    
KIAA17 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
              160       170       180       190       200       210

          250       260       270       280       290       300    
KIAA17 LMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 LMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
              220       230       240       250       260       270

          310       320       330       340       350       360    
KIAA17 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
              280       290       300       310       320       330

          370       380       390       400       410       420    
KIAA17 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
              340       350       360       370       380       390

          430       440       450       460       470       480    
KIAA17 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
              400       410       420       430       440       450

          490       500       510       520       530       540    
KIAA17 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
              460       470       480       490       500       510

          550       560       570       580       590       600    
KIAA17 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSFVPETF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSFVPETF
              520       530       540       550       560       570

          610       620       630       640       650       660    
KIAA17 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
              580       590       600       610       620       630

          670       680       690       700       710       720    
KIAA17 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
              640       650       660       670       680       690

          730       740       750       760       770       780    
KIAA17 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
              700       710       720       730       740       750

          790       800       810       820       830       840    
KIAA17 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
              760       770       780       790       800       810

          850       860       870       880       890       900    
KIAA17 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
              820       830       840       850       860       870

          910       920       930       940       950       960    
KIAA17 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
              880       890       900       910       920       930

          970       980       990      1000      1010      1020    
KIAA17 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
              940       950       960       970       980       990

         1030      1040      1050      1060      1070      1080    
KIAA17 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
             1000      1010      1020      1030      1040      1050

         1090      1100      1110      1120      1130      1140    
KIAA17 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
             1060      1070      1080      1090      1100      1110

         1150      1160      1170      1180      1190      1200    
KIAA17 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
             1120      1130      1140      1150      1160      1170

         1210      1220      1230      1240      1250      1260    
KIAA17 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
             1180      1190      1200      1210      1220      1230

         1270      1280      1290      1300      1310      1320    
KIAA17 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
             1240      1250      1260      1270      1280      1290

         1330      1340      1350      1360      1370      1380    
KIAA17 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
             1300      1310      1320      1330      1340      1350

         1390      1400      1410      1420      1430      1440    
KIAA17 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
             1360      1370      1380      1390      1400      1410

         1450      1460      1470      1480      1490      1500    
KIAA17 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLNVDPGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLNVDPGT
             1420      1430      1440      1450      1460      1470

         1510      1520      1530      1540      1550      1560    
KIAA17 YTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 YTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
             1480      1490      1500      1510      1520      1530

         1570      1580      1590      1600      1610      1620    
KIAA17 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
             1540      1550      1560      1570      1580      1590

         1630      1640      1650      1660      1670      1680    
KIAA17 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
             1600      1610      1620      1630      1640      1650

         1690      1700      1710      1720      1730      1740    
KIAA17 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
             1660      1670      1680      1690      1700      1710

         1750      1760      1770      1780      1790      1800    
KIAA17 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
             1720      1730      1740      1750      1760      1770

         1810      1820      1830      1840      1850      1860    
KIAA17 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
             1780      1790      1800      1810      1820      1830

         1870      1880      1890      1900      1910      1920    
KIAA17 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
             1840      1850      1860      1870      1880      1890

         1930      1940      1950      1960      1970      1980    
KIAA17 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
             1900      1910      1920      1930      1940      1950

         1990      2000      2010      2020      2030      2040    
KIAA17 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
             1960      1970      1980      1990      2000      2010

         2050      2060      2070      2080      2090      2100    
KIAA17 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|216 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
             2020      2030      2040      2050      2060      2070

         2110    
KIAA17 RVCRRPTMPS
       ::::::::::
gi|216 RVCRRPTMPS
             2080

>>gi|119595661|gb|EAW75255.1| peroxisomal proliferator-a  (2080 aa)
 initn: 14106 init1: 14106 opt: 14106  Z-score: 15243.0  bits: 2834.1 E():    0
Smith-Waterman score: 14106;  99.904% identity (99.952% similar) in 2080 aa overlap (35-2114:1-2080)

           10        20        30        40        50        60    
KIAA17 SQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                     ::::::::::::::::::::::::::::::
gi|119                               MSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                             10        20        30

           70        80        90       100       110       120    
KIAA17 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
               40        50        60        70        80        90

          130       140       150       160       170       180    
KIAA17 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
              100       110       120       130       140       150

          190       200       210       220       230       240    
KIAA17 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
              160       170       180       190       200       210

          250       260       270       280       290       300    
KIAA17 LMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
              220       230       240       250       260       270

          310       320       330       340       350       360    
KIAA17 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
              280       290       300       310       320       330

          370       380       390       400       410       420    
KIAA17 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
              340       350       360       370       380       390

          430       440       450       460       470       480    
KIAA17 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
              400       410       420       430       440       450

          490       500       510       520       530       540    
KIAA17 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
              460       470       480       490       500       510

          550       560       570       580       590       600    
KIAA17 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSFVPETF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSFVPETF
              520       530       540       550       560       570

          610       620       630       640       650       660    
KIAA17 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
              580       590       600       610       620       630

          670       680       690       700       710       720    
KIAA17 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
              640       650       660       670       680       690

          730       740       750       760       770       780    
KIAA17 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
              700       710       720       730       740       750

          790       800       810       820       830       840    
KIAA17 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
              760       770       780       790       800       810

          850       860       870       880       890       900    
KIAA17 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
              820       830       840       850       860       870

          910       920       930       940       950       960    
KIAA17 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
              880       890       900       910       920       930

          970       980       990      1000      1010      1020    
KIAA17 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
              940       950       960       970       980       990

         1030      1040      1050      1060      1070      1080    
KIAA17 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
             1000      1010      1020      1030      1040      1050

         1090      1100      1110      1120      1130      1140    
KIAA17 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
             1060      1070      1080      1090      1100      1110

         1150      1160      1170      1180      1190      1200    
KIAA17 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
             1120      1130      1140      1150      1160      1170

         1210      1220      1230      1240      1250      1260    
KIAA17 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
             1180      1190      1200      1210      1220      1230

         1270      1280      1290      1300      1310      1320    
KIAA17 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
             1240      1250      1260      1270      1280      1290

         1330      1340      1350      1360      1370      1380    
KIAA17 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
             1300      1310      1320      1330      1340      1350

         1390      1400      1410      1420      1430      1440    
KIAA17 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
             1360      1370      1380      1390      1400      1410

         1450      1460      1470      1480      1490      1500    
KIAA17 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLNVDPGT
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|119 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLNVDPGT
             1420      1430      1440      1450      1460      1470

         1510      1520      1530      1540      1550      1560    
KIAA17 YTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
       :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 YTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
             1480      1490      1500      1510      1520      1530

         1570      1580      1590      1600      1610      1620    
KIAA17 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
             1540      1550      1560      1570      1580      1590

         1630      1640      1650      1660      1670      1680    
KIAA17 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
             1600      1610      1620      1630      1640      1650

         1690      1700      1710      1720      1730      1740    
KIAA17 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
             1660      1670      1680      1690      1700      1710

         1750      1760      1770      1780      1790      1800    
KIAA17 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
             1720      1730      1740      1750      1760      1770

         1810      1820      1830      1840      1850      1860    
KIAA17 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
             1780      1790      1800      1810      1820      1830

         1870      1880      1890      1900      1910      1920    
KIAA17 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
             1840      1850      1860      1870      1880      1890

         1930      1940      1950      1960      1970      1980    
KIAA17 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
             1900      1910      1920      1930      1940      1950

         1990      2000      2010      2020      2030      2040    
KIAA17 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
             1960      1970      1980      1990      2000      2010

         2050      2060      2070      2080      2090      2100    
KIAA17 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
             2020      2030      2040      2050      2060      2070

         2110    
KIAA17 RVCRRPTMPS
       ::::::::::
gi|119 RVCRRPTMPS
             2080

>>gi|66347335|emb|CAI95749.1| peroxisomal proliferator-a  (2080 aa)
 initn: 14093 init1: 14093 opt: 14093  Z-score: 15229.0  bits: 2831.5 E():    0
Smith-Waterman score: 14093;  99.808% identity (99.952% similar) in 2080 aa overlap (35-2114:1-2080)

           10        20        30        40        50        60    
KIAA17 SQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                     ::::::::::::::::::::::::::::::
gi|663                               MSSSPSRSAADIYIREYFHSHVSGGHPEAT
                                             10        20        30

           70        80        90       100       110       120    
KIAA17 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 PLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQARELRVPVG
               40        50        60        70        80        90

          130       140       150       160       170       180    
KIAA17 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 FFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEHTLLHR
              100       110       120       130       140       150

          190       200       210       220       230       240    
KIAA17 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPHPRHYP
              160       170       180       190       200       210

          250       260       270       280       290       300    
KIAA17 LMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 LMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVSHGAQV
              220       230       240       250       260       270

          310       320       330       340       350       360    
KIAA17 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 SALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTDARVLN
              280       290       300       310       320       330

          370       380       390       400       410       420    
KIAA17 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 TVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQGVAQRR
              340       350       360       370       380       390

          430       440       450       460       470       480    
KIAA17 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 RWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITATTAQT
              400       410       420       430       440       450

          490       500       510       520       530       540    
KIAA17 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 EAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAILRELL
              460       470       480       490       500       510

          550       560       570       580       590       600    
KIAA17 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSFVPETF
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
gi|663 DESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLHAEPERYRHCSFVPETF
              520       530       540       550       560       570

          610       620       630       640       650       660    
KIAA17 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 ERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKR
              580       590       600       610       620       630

          670       680       690       700       710       720    
KIAA17 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 HELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLERLTAEA
              640       650       660       670       680       690

          730       740       750       760       770       780    
KIAA17 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 RHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQATITKV
              700       710       720       730       740       750

          790       800       810       820       830       840    
KIAA17 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 LQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITDVASFV
              760       770       780       790       800       810

          850       860       870       880       890       900    
KIAA17 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 PRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTMEKASGQ
              820       830       840       850       860       870

          910       920       930       940       950       960    
KIAA17 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 LKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSRLLRRH
              880       890       900       910       920       930

          970       980       990      1000      1010      1020    
KIAA17 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 RLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPR
              940       950       960       970       980       990

         1030      1040      1050      1060      1070      1080    
KIAA17 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 SQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQMV
             1000      1010      1020      1030      1040      1050

         1090      1100      1110      1120      1130      1140    
KIAA17 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 DLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYL
             1060      1070      1080      1090      1100      1110

         1150      1160      1170      1180      1190      1200    
KIAA17 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 DVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLD
             1120      1130      1140      1150      1160      1170

         1210      1220      1230      1240      1250      1260    
KIAA17 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 KLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRV
             1180      1190      1200      1210      1220      1230

         1270      1280      1290      1300      1310      1320    
KIAA17 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 YSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQRREL
             1240      1250      1260      1270      1280      1290

         1330      1340      1350      1360      1370      1380    
KIAA17 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 VQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERP
             1300      1310      1320      1330      1340      1350

         1390      1400      1410      1420      1430      1440    
KIAA17 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 GDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEASRTP
             1360      1370      1380      1390      1400      1410

         1450      1460      1470      1480      1490      1500    
KIAA17 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLNVDPGT
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|663 QGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLNVDPGT
             1420      1430      1440      1450      1460      1470

         1510      1520      1530      1540      1550      1560    
KIAA17 YTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
       :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 YTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLP
             1480      1490      1500      1510      1520      1530

         1570      1580      1590      1600      1610      1620    
KIAA17 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 DLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNV
             1540      1550      1560      1570      1580      1590

         1630      1640      1650      1660      1670      1680    
KIAA17 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 AVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYC
             1600      1610      1620      1630      1640      1650

         1690      1700      1710      1720      1730      1740    
KIAA17 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 GPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLR
             1660      1670      1680      1690      1700      1710

         1750      1760      1770      1780      1790      1800    
KIAA17 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 SITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILC
             1720      1730      1740      1750      1760      1770

         1810      1820      1830      1840      1850      1860    
KIAA17 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 TCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNE
             1780      1790      1800      1810      1820      1830

         1870      1880      1890      1900      1910      1920    
KIAA17 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 RLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGH
             1840      1850      1860      1870      1880      1890

         1930      1940      1950      1960      1970      1980    
KIAA17 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIA
             1900      1910      1920      1930      1940      1950

         1990      2000      2010      2020      2030      2040    
KIAA17 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 VLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKS
             1960      1970      1980      1990      2000      2010

         2050      2060      2070      2080      2090      2100    
KIAA17 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|663 WLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQV
             2020      2030      2040      2050      2060      2070

         2110    
KIAA17 RVCRRPTMPS
       ::::::::::
gi|663 RVCRRPTMPS
             2080

>>gi|209572784|sp|Q9BYK8.5|PR285_HUMAN RecName: Full=Per  (2649 aa)
 initn: 14073 init1: 14073 opt: 14073  Z-score: 15205.9  bits: 2827.6 E():    0
Smith-Waterman score: 14073;  99.424% identity (99.616% similar) in 2085 aa overlap (30-2114:565-2649)

                10        20        30        40        50         
KIAA17  LTSDSQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGG
                                     :  : .  . . ::::::::::::::::::
gi|209 RRVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYFHSHVSGG
          540       550       560       570       580       590    

      60        70        80        90       100       110         
KIAA17 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
          600       610       620       630       640       650    

     120       130       140       150       160       170         
KIAA17 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
          660       670       680       690       700       710    

     180       190       200       210       220       230         
KIAA17 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
          720       730       740       750       760       770    

     240       250       260       270       280       290         
KIAA17 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
          780       790       800       810       820       830    

     300       310       320       330       340       350         
KIAA17 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
          840       850       860       870       880       890    

     360       370       380       390       400       410         
KIAA17 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
          900       910       920       930       940       950    

     420       430       440       450       460       470         
KIAA17 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
          960       970       980       990      1000      1010    

     480       490       500       510       520       530         
KIAA17 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
         1020      1030      1040      1050      1060      1070    

     540       550       560       570       580       590         
KIAA17 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
         1080      1090      1100      1110      1120      1130    

     600       610       620       630       640       650         
KIAA17 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
         1140      1150      1160      1170      1180      1190    

     660       670       680       690       700       710         
KIAA17 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
         1200      1210      1220      1230      1240      1250    

     720       730       740       750       760       770         
KIAA17 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
         1260      1270      1280      1290      1300      1310    

     780       790       800       810       820       830         
KIAA17 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
         1320      1330      1340      1350      1360      1370    

     840       850       860       870       880       890         
KIAA17 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
         1380      1390      1400      1410      1420      1430    

     900       910       920       930       940       950         
KIAA17 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
         1440      1450      1460      1470      1480      1490    

     960       970       980       990      1000      1010         
KIAA17 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
         1500      1510      1520      1530      1540      1550    

    1020      1030      1040      1050      1060      1070         
KIAA17 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
         1560      1570      1580      1590      1600      1610    

    1080      1090      1100      1110      1120      1130         
KIAA17 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
         1620      1630      1640      1650      1660      1670    

    1140      1150      1160      1170      1180      1190         
KIAA17 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
         1680      1690      1700      1710      1720      1730    

    1200      1210      1220      1230      1240      1250         
KIAA17 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
         1740      1750      1760      1770      1780      1790    

    1260      1270      1280      1290      1300      1310         
KIAA17 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
         1800      1810      1820      1830      1840      1850    

    1320      1330      1340      1350      1360      1370         
KIAA17 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
         1860      1870      1880      1890      1900      1910    

    1380      1390      1400      1410      1420      1430         
KIAA17 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
         1920      1930      1940      1950      1960      1970    

    1440      1450      1460      1470      1480      1490         
KIAA17 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLN
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
gi|209 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLN
         1980      1990      2000      2010      2020      2030    

    1500      1510      1520      1530      1540      1550         
KIAA17 VDPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
       ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|209 VDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
         2040      2050      2060      2070      2080      2090    

    1560      1570      1580      1590      1600      1610         
KIAA17 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
         2100      2110      2120      2130      2140      2150    

    1620      1630      1640      1650      1660      1670         
KIAA17 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
         2160      2170      2180      2190      2200      2210    

    1680      1690      1700      1710      1720      1730         
KIAA17 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
         2220      2230      2240      2250      2260      2270    

    1740      1750      1760      1770      1780      1790         
KIAA17 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
         2280      2290      2300      2310      2320      2330    

    1800      1810      1820      1830      1840      1850         
KIAA17 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
         2340      2350      2360      2370      2380      2390    

    1860      1870      1880      1890      1900      1910         
KIAA17 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
         2400      2410      2420      2430      2440      2450    

    1920      1930      1940      1950      1960      1970         
KIAA17 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
         2460      2470      2480      2490      2500      2510    

    1980      1990      2000      2010      2020      2030         
KIAA17 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
         2520      2530      2540      2550      2560      2570    

    2040      2050      2060      2070      2080      2090         
KIAA17 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|209 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
         2580      2590      2600      2610      2620      2630    

    2100      2110    
KIAA17 PAGQVRVCRRPTMPS
       :::::::::::::::
gi|209 PAGQVRVCRRPTMPS
         2640         

>>gi|156105693|ref|NP_001032412.2| PPAR-alpha interactin  (2649 aa)
 initn: 14060 init1: 14060 opt: 14060  Z-score: 15191.9  bits: 2825.0 E():    0
Smith-Waterman score: 14060;  99.329% identity (99.616% similar) in 2085 aa overlap (30-2114:565-2649)

                10        20        30        40        50         
KIAA17  LTSDSQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGG
                                     :  : .  . . ::::::::::::::::::
gi|156 RRVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYFHSHVSGG
          540       550       560       570       580       590    

      60        70        80        90       100       110         
KIAA17 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
          600       610       620       630       640       650    

     120       130       140       150       160       170         
KIAA17 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
          660       670       680       690       700       710    

     180       190       200       210       220       230         
KIAA17 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
          720       730       740       750       760       770    

     240       250       260       270       280       290         
KIAA17 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
       :::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|156 PRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
          780       790       800       810       820       830    

     300       310       320       330       340       350         
KIAA17 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
          840       850       860       870       880       890    

     360       370       380       390       400       410         
KIAA17 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
          900       910       920       930       940       950    

     420       430       440       450       460       470         
KIAA17 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
          960       970       980       990      1000      1010    

     480       490       500       510       520       530         
KIAA17 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
         1020      1030      1040      1050      1060      1070    

     540       550       560       570       580       590         
KIAA17 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
       ::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|156 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLHAEPERYRHCSF
         1080      1090      1100      1110      1120      1130    

     600       610       620       630       640       650         
KIAA17 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
         1140      1150      1160      1170      1180      1190    

     660       670       680       690       700       710         
KIAA17 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
         1200      1210      1220      1230      1240      1250    

     720       730       740       750       760       770         
KIAA17 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
         1260      1270      1280      1290      1300      1310    

     780       790       800       810       820       830         
KIAA17 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
         1320      1330      1340      1350      1360      1370    

     840       850       860       870       880       890         
KIAA17 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
         1380      1390      1400      1410      1420      1430    

     900       910       920       930       940       950         
KIAA17 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
         1440      1450      1460      1470      1480      1490    

     960       970       980       990      1000      1010         
KIAA17 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
         1500      1510      1520      1530      1540      1550    

    1020      1030      1040      1050      1060      1070         
KIAA17 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
         1560      1570      1580      1590      1600      1610    

    1080      1090      1100      1110      1120      1130         
KIAA17 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
         1620      1630      1640      1650      1660      1670    

    1140      1150      1160      1170      1180      1190         
KIAA17 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
         1680      1690      1700      1710      1720      1730    

    1200      1210      1220      1230      1240      1250         
KIAA17 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
         1740      1750      1760      1770      1780      1790    

    1260      1270      1280      1290      1300      1310         
KIAA17 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
         1800      1810      1820      1830      1840      1850    

    1320      1330      1340      1350      1360      1370         
KIAA17 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
         1860      1870      1880      1890      1900      1910    

    1380      1390      1400      1410      1420      1430         
KIAA17 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
         1920      1930      1940      1950      1960      1970    

    1440      1450      1460      1470      1480      1490         
KIAA17 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLN
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
gi|156 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLN
         1980      1990      2000      2010      2020      2030    

    1500      1510      1520      1530      1540      1550         
KIAA17 VDPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
       ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|156 VDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
         2040      2050      2060      2070      2080      2090    

    1560      1570      1580      1590      1600      1610         
KIAA17 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
         2100      2110      2120      2130      2140      2150    

    1620      1630      1640      1650      1660      1670         
KIAA17 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
         2160      2170      2180      2190      2200      2210    

    1680      1690      1700      1710      1720      1730         
KIAA17 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
         2220      2230      2240      2250      2260      2270    

    1740      1750      1760      1770      1780      1790         
KIAA17 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
         2280      2290      2300      2310      2320      2330    

    1800      1810      1820      1830      1840      1850         
KIAA17 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
         2340      2350      2360      2370      2380      2390    

    1860      1870      1880      1890      1900      1910         
KIAA17 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
         2400      2410      2420      2430      2440      2450    

    1920      1930      1940      1950      1960      1970         
KIAA17 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
         2460      2470      2480      2490      2500      2510    

    1980      1990      2000      2010      2020      2030         
KIAA17 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
         2520      2530      2540      2550      2560      2570    

    2040      2050      2060      2070      2080      2090         
KIAA17 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
         2580      2590      2600      2610      2620      2630    

    2100      2110    
KIAA17 PAGQVRVCRRPTMPS
       :::::::::::::::
gi|156 PAGQVRVCRRPTMPS
         2640         

>>gi|78126069|dbj|BAE46995.1| PPAR gamma DBD-interacting  (2649 aa)
 initn: 14052 init1: 14052 opt: 14052  Z-score: 15183.2  bits: 2823.4 E():    0
Smith-Waterman score: 14052;  99.281% identity (99.616% similar) in 2085 aa overlap (30-2114:565-2649)

                10        20        30        40        50         
KIAA17  LTSDSQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGG
                                     :  : .  . . ::::::::::::::::::
gi|781 RRVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYFHSHVSGG
          540       550       560       570       580       590    

      60        70        80        90       100       110         
KIAA17 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
          600       610       620       630       640       650    

     120       130       140       150       160       170         
KIAA17 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
          660       670       680       690       700       710    

     180       190       200       210       220       230         
KIAA17 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
          720       730       740       750       760       770    

     240       250       260       270       280       290         
KIAA17 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
          780       790       800       810       820       830    

     300       310       320       330       340       350         
KIAA17 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
       : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 HDAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
          840       850       860       870       880       890    

     360       370       380       390       400       410         
KIAA17 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
          900       910       920       930       940       950    

     420       430       440       450       460       470         
KIAA17 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
          960       970       980       990      1000      1010    

     480       490       500       510       520       530         
KIAA17 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
         1020      1030      1040      1050      1060      1070    

     540       550       560       570       580       590         
KIAA17 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
         1080      1090      1100      1110      1120      1130    

     600       610       620       630       640       650         
KIAA17 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
         1140      1150      1160      1170      1180      1190    

     660       670       680       690       700       710         
KIAA17 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
         1200      1210      1220      1230      1240      1250    

     720       730       740       750       760       770         
KIAA17 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
         1260      1270      1280      1290      1300      1310    

     780       790       800       810       820       830         
KIAA17 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
         1320      1330      1340      1350      1360      1370    

     840       850       860       870       880       890         
KIAA17 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
         1380      1390      1400      1410      1420      1430    

     900       910       920       930       940       950         
KIAA17 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
         1440      1450      1460      1470      1480      1490    

     960       970       980       990      1000      1010         
KIAA17 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
         1500      1510      1520      1530      1540      1550    

    1020      1030      1040      1050      1060      1070         
KIAA17 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
         1560      1570      1580      1590      1600      1610    

    1080      1090      1100      1110      1120      1130         
KIAA17 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
         1620      1630      1640      1650      1660      1670    

    1140      1150      1160      1170      1180      1190         
KIAA17 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
         1680      1690      1700      1710      1720      1730    

    1200      1210      1220      1230      1240      1250         
KIAA17 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
         1740      1750      1760      1770      1780      1790    

    1260      1270      1280      1290      1300      1310         
KIAA17 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
         1800      1810      1820      1830      1840      1850    

    1320      1330      1340      1350      1360      1370         
KIAA17 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
       ::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|781 QRRELVQVQRSHCGHFLEAARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
         1860      1870      1880      1890      1900      1910    

    1380      1390      1400      1410      1420      1430         
KIAA17 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
         1920      1930      1940      1950      1960      1970    

    1440      1450      1460      1470      1480      1490         
KIAA17 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLN
         1980      1990      2000      2010      2020      2030    

    1500      1510      1520      1530      1540      1550         
KIAA17 VDPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 VDPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
         2040      2050      2060      2070      2080      2090    

    1560      1570      1580      1590      1600      1610         
KIAA17 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
         2100      2110      2120      2130      2140      2150    

    1620      1630      1640      1650      1660      1670         
KIAA17 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
       ::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|781 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGSPPRGEKRLGGP
         2160      2170      2180      2190      2200      2210    

    1680      1690      1700      1710      1720      1730         
KIAA17 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
         2220      2230      2240      2250      2260      2270    

    1740      1750      1760      1770      1780      1790         
KIAA17 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
         2280      2290      2300      2310      2320      2330    

    1800      1810      1820      1830      1840      1850         
KIAA17 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|781 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKAVLLGDHKQLRP
         2340      2350      2360      2370      2380      2390    

    1860      1870      1880      1890      1900      1910         
KIAA17 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
         2400      2410      2420      2430      2440      2450    

    1920      1930      1940      1950      1960      1970         
KIAA17 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
         2460      2470      2480      2490      2500      2510    

    1980      1990      2000      2010      2020      2030         
KIAA17 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|781 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
         2520      2530      2540      2550      2560      2570    

    2040      2050      2060      2070      2080      2090         
KIAA17 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
       :::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
gi|781 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDLCEAQQTLV
         2580      2590      2600      2610      2620      2630    

    2100      2110    
KIAA17 PAGQVRVCRRPTMPS
       :::::::::::::::
gi|781 PAGQVRVCRRPTMPS
         2640         

>>gi|73992747|ref|XP_543098.2| PREDICTED: similar to Per  (2932 aa)
 initn: 9319 init1: 3554 opt: 10160  Z-score: 10973.6  bits: 2044.6 E():    0
Smith-Waterman score: 10161;  71.381% identity (87.985% similar) in 2114 aa overlap (13-2112:803-2911)

                                 10        20         30        40 
KIAA17                   LTSDSQTRAVLRGSSAGHTVG-ALADSTEAPSKKPMSSSPSR
                                     :..  .:.. :  .  . :  : .  . . 
gi|739 RKQKLAVAFIAGSSPGGRRPIAPLLIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTN
            780       790       800       810       820       830  

              50        60        70        80        90       100 
KIAA17 SAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRA
       :::::::.:.::..::.:::::.:::::::::: :::: ..:::::::.::.::: ::::
gi|739 SAADIYIEEHFHGYVSSGHPEAAPLRVMYTDRPPSQTDATVLQYCCLTQDRRAFRAPTRA
            840       850       860       870       880       890  

             110       120       130       140       150       160 
KIAA17 ELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDH
       :: .::.::::::::::::::.::::::::::::::::::::::: ::. :::.::::::
gi|739 ELEQHRIVVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDH
            900       910       920       930       940       950  

             170       180       190       200       210       220 
KIAA17 MQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRH
       :::::::::: ::.:: ::::.:::  ::.:.::::..:::.::.::: :.::.::.:::
gi|739 MQVTPRLFSVPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRH
            960       970       980       990      1000      1010  

             230       240       250       260       270       280 
KIAA17 FYVAKGNPIHARGKVPPHPRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYN
       ::::::.:::: :.:::::: .:::::::::::.::.: .:::: ::.:::::.:.. ..
gi|739 FYVAKGSPIHASGRVPPHPRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQVRDLHD
           1020      1030      1040      1050      1060      1070  

             290       300       310       320       330       340 
KIAA17 TWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVH
        ::::::.:::. ::::::::::.:::::::.:.:::::::::::::::.::::::::::
gi|739 GWPSCWGAREQKHICVVSHGAQVTALRQELRKRNLGQVSVGSFEILPGREFRVVVLSTVH
           1080      1090      1100      1110      1120      1130  

             350       360       370       380       390       400 
KIAA17 TCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECV
       . .:::: :. .  ::::::::::..::::::.:.::.:.:::: :::.:::.:::::::
gi|739 NHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGACSKLWKSFIRECV
           1140      1150      1160      1170      1180      1190  

             410       420       430       440         450         
KIAA17 ERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEP--VGDLAEEQAAV-VT
       ..::::::.::.:..:::: :..::  .. ...::.  .:.::   .:. : :.::. .:
gi|739 KHHSVCPESLSLEHIEQGVLQQQRWALQAGRSAAAAALDAVPEERAAGEPAPERAATGAT
           1200      1210      1220      1230      1240      1250  

      460       470       480              490       500       510 
KIAA17 AMVKAEPGDEALSPASRDITAT----TAQTE---AAAAPAGDAVKEDVVPGACAAGAAAA
       :  .:: :: :   ..:  ...    :. ::   :..::.  .   : .    .:: .:.
gi|739 AAPRAEAGDAASRSVARGCSVVGGPATVPTEVEGATSAPSRTSSLGDGTSRNAVAGLTAT
           1260      1270      1280      1290      1300      1310  

             520       530       540       550       560       570 
KIAA17 AGVESTEAEDAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQ
        . .  . ::.:.:::: : ::::::.::.:::::...: ::: :::::::.::::: .:
gi|739 ENRDPEDPEDTESDFWPSDTELNADDSILQELLDEGRNVTVTVREDGLLDTIARPESPHQ
           1320      1330      1340      1350      1360      1370  

             580       590       600       610       620       630 
KIAA17 ARLYENLPPAALRKLLRAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMA
       :: : .:: :.:.::: .::: ::::.:: ::::.:.:.::::..:.:::.:::: ::::
gi|739 ARQYTHLPRATLQKLLCSEPELYRHCAFVQETFEQATALPLDDVASSPIQIRGRLHCGMA
           1380      1390      1400      1410      1420      1430  

             640       650       660       670       680       690 
KIAA17 FAGDEVLVQLLSGDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKI
       :.::::::..:. : .  :: .: :.:::::::.::.:::::: :: :::.:..::::::
gi|739 FSGDEVLVKVLGQDTGCPGRRQGCVVGVLKRKRRELVFVCRMDEWDSRIMTPVDGSVTKI
           1440      1450      1460      1470      1480      1490  

             700       710       720       730       740       750 
KIAA17 FVAELKDPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREV
       :::::::: ::::. ...::.:::: :::::::: ::::::.:::::: :::::::: ::
gi|739 FVAELKDPLQVPIHRVQQGRVQRVGYERLTAEARGSRLFWVRIVLWRQRFYYPLGIVLEV
           1500      1510      1520      1530      1540      1550  

             760       770       780       790       800       810 
KIAA17 LPEASTWEQGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVD
       ::::.:::::::.: ::..:. :  . :.. ::::::..::::.  .:::::.: :::::
gi|739 LPEATTWEQGLRVLDLEHGLKKPSLEPAALCKVLQKYRAELGRAPDHREDCRGFPTFTVD
           1560      1570      1580      1590      1600      1610  

             820       830       840       850       860       870 
KIAA17 PQGACNLDDALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPM
       ::::  ::::::::::::: .:::::.:::: .::::..:.:::::: .:::: ::::::
gi|739 PQGAQYLDDALSVRDLGPRYQVAVHIADVASSLPRDGAVDLEARRQGITFYAPDREPVPM
           1620      1630      1640      1650      1660      1670  

             880       890       900       910       920       930 
KIAA17 LPASLCQDVLSLLPGRDRLAISLFLTMEKASGQLKSLRFAPSVVQSDRQLSYEEAEEVIR
       ::::::.::::::::.::::::::::.::.: :.:::.:::::. ::::::::::: :::
gi|739 LPASLCRDVLSLLPGQDRLAISLFLTVEKGSDQIKSLHFAPSVICSDRQLSYEEAEAVIR
           1680      1690      1700      1710      1720      1730  

             940       950       960       970       980       990 
KIAA17 QHPGAGRELPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVK
       .:::.::::::.::::::::::::.:::.:::.::..:  ::::.:: .:::::::.:.:
gi|739 RHPGGGRELPAQLDSVDACVVAACHFSRVLRRRRLQTDSHYEQPSEDCVLGFRAAHVMIK
           1740      1750      1760      1770      1780      1790  

            1000      1010      1020      1030      1040      1050 
KIAA17 EYMIQFNRLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHG
       ::::::: ::::.::.:: :::::::::::.:  .:: :::.:: . : ::::: ::: .
gi|739 EYMIQFNSLVAELLVSSEPTRTVTPLRWQPTPGERQLGALCDKHQELVALSLHLRHHLPS
           1800      1810      1820      1830      1840      1850  

            1060      1070      1080      1090      1100      1110 
KIAA17 GGGSPPDTRLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSA
        :.  : ....::::::..::.:::. :.... ::.::::.:: :::.: :::::: :::
gi|739 RGS--PGSHIYLLASLWEHVQLAARAGDWNRVEDLITTDDLHPSLAPVGLDLRKALARSA
             1860      1870      1880      1890      1900      1910

            1120      1130      1140      1150      1160      1170 
KIAA17 FGRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGL
       :::  .:..:..::::::::::::::::::::::::::::::::::.:: ::::::::::
gi|739 FGRSCQGERQEAGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGRGGPAYSARDIDGL
             1920      1930      1940      1950      1960      1970

            1180      1190      1200      1210      1220      1230 
KIAA17 CQAFSLQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLP
       :: :: ::. ::::::.:::::::.:::.:: .:::::: ::.::::::::::.. :.::
gi|739 CQEFSYQHGRAQSYQRQARSLHLAAQLKVQPRSKLGFVVGVETGSRCFRLLFPADPEALP
             1980      1990      2000      2010      2020      2030

            1240      1250      1260      1270      1280      1290 
KIAA17 DPCPVPYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETA
       : ::: : ::::::::  : :::::::.::::.::. ...:  ::::.. ::::  :...
gi|739 DLCPVHYRSLQLAEHPGNLEGRPGLRLVWRRRIYSVWADGPRSPLPGALLDPHTRPVDAS
             2040      2050      2060      2070      2080      2090

            1300      1310       1320      1330      1340      1350
KIAA17 LWKQLLELVELQRWPEAAALIQEKGEAS-QRRELVQVQRSHCGHFLEVARELGSGDTLQV
       ::.::::::. ::::: :::..:.: :. :.: : .: .: ::::.:::::::.::::::
gi|739 LWQQLLELVQEQRWPELAALVREQGAAKPQQRMLGRVWQSPCGHFVEVARELGGGDTLQV
             2100      2110      2120      2130      2140      2150

             1360      1370      1380      1390      1400      1410
KIAA17 QLGTSLQHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVW
       ::...::.:::.:: :: ::::::.:::::::: :.::  .. .: :::  :: ::. ::
gi|739 QLSATLQRGFLAPSLQLCTVAPGFTLCLEHVERLGSCFLDQMPQAVRDRCPDVAEYSRVW
             2160      2170      2180      2190      2200      2210

             1420      1430      1440      1450      1460      1470
KIAA17 EPFCALESATGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSC
        :::.:::::::: :.::.::::.:.::.... :: .:.:.: ::..:: :.: :..:. 
gi|739 GPFCSLESATGAVLESDSITLQHVSISWDVKQMPQRRLRGSFCLESSFLSEHCIDLSFGH
             2220      2230      2240      2250      2260      2270

             1480      1490      1500      1510       1520         
KIAA17 CYLCIRLEGLLAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTEDWD-QERRADRQEAPR
       ::::.:::::: : :.:  :::. :: :..:: :::::::: ::::: .: ::::::.:.
gi|739 CYLCLRLEGLLPPPATPACGPSGPGPFLSIDPDTYTWVAHGLTEDWDPKEGRADRQETPK
             2280      2290      2300      2310      2320      2330

    1530      1540      1550      1560      1570      1580         
KIAA17 RVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALGR
       .::.:..::.::::::::::::. ::.:.:::::::.:::::::::..::::: .:::::
gi|739 QVHFFIQHMAMEKVPEEVLRPGARFTIEVLPKQLPDIRKEEAVRGLKRASPLVINIALGR
             2340      2350      2360      2370      2380      2390

    1590      1600      1610      1620      1630      1640         
KIAA17 PVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVG
       :.: :  : . :.:::.:....::: : :: ::: ::: ::.: :::::::::::::.:.
gi|739 PIPLP--RQLLSQFLEKQAFDLPGGPHTLNRSQNRAVRAALKKQFTVIQGPPGTGKTVVA
               2400      2410      2420      2430      2440        

    1650      1660      1670      1680      1690       1700        
KIAA17 LHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLL-RRMELKPLR
       .::::::::::.::.     :: ::.:::::::::::::::::::::::: :: ::::::
gi|739 FHIVFWFHKSNEEQTGACDTPR-EKQLGGPCILYCGPSNKSVDVLAGLLLSRRAELKPLR
     2450      2460      2470       2480      2490      2500       

     1710      1720      1730      1740      1750      1760        
KIAA17 VYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDT
       ::::::::.::::: :::: : .::::::::::.:::::::::.::. :::. .:. ::.
gi|739 VYSEQAEATEFPVPGVGSRGLPKKSPREGRPNQTLRSITLHHRVRQSSNPYAPDIRDFDA
      2510      2520      2530      2540      2550      2560       

     1770      1780      1790      1800      1810      1820        
KIAA17 RLQRGELFSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEAG
       :::.::..:.::: ::: .: .:::::::.:.::::::::::::::. :::::::.::::
gi|739 RLQKGEILSKEDLSWYKTILGKARKFELDQHRVILCTCSCAASASLRKLDVRQILIDEAG
      2570      2580      2590      2600      2610      2620       

     1830      1840      1850      1860      1870      1880        
KIAA17 MATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLDT
       :::::::::::: : .::::::::::::::::::::.::::::::::::::: :::::::
gi|739 MATEPETLIPLVAFSKAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHVDAHMLDT
      2630      2640      2650      2660      2670      2680       

     1890      1900      1910      1920      1930      1940        
KIAA17 QYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVST
       :::::::::::::. ::..:::::::::::::.::: ::::: ::::::::::.::::::
gi|739 QYRMHEGICAFPSMEFYEKKLKTWQGLRRPPSILGHIGKESCSVIFGHVQGHEQSLLVST
      2690      2700      2710      2720      2730      2740       

     1950      1960      1970      1980      1990      2000        
KIAA17 DEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGV
       :::::::::: :::: ::::.:::::::::::.:.:.::::::::.:::: : :::..::
gi|739 DEGNENSKANPEEVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREGVSGV
      2750      2760      2770      2780      2790      2800       

     2010      2020      2030      2040      2050      2060        
KIAA17 AVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQE
       .: ::::::::::::::::::::: .:::::::::::::.::::::::::::::.:::.:
gi|739 TVCSITKSQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRARE
      2810      2820      2830      2840      2850      2860       

     2070      2080      2090      2100      2110                  
KIAA17 GLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS              
       :::.:::: :: :::::: .:::::::..:::::::::::::..                
gi|739 GLCVIGDHRLLSCCPLWRRFLDFCEAQRSLVPAGQVRVCRRPAVAPGSGRSTCPGLGLPR
      2870      2880      2890      2900      2910      2920       

gi|739 GKAKP
      2930  

>>gi|119595663|gb|EAW75257.1| peroxisomal proliferator-a  (2542 aa)
 initn: 11544 init1: 8603 opt: 8603  Z-score: 9290.6  bits: 1733.0 E():    0
Smith-Waterman score: 13140;  94.293% identity (94.484% similar) in 2085 aa overlap (30-2114:565-2542)

                10        20        30        40        50         
KIAA17  LTSDSQTRAVLRGSSAGHTVGALADSTEAPSKKPMSSSPSRSAADIYIREYFHSHVSGG
                                     :  : .  . . ::::::::::::::::::
gi|119 RRVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAADIYIREYFHSHVSGG
          540       550       560       570       580       590    

      60        70        80        90       100       110         
KIAA17 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRAELARHRVVVTTTSQAREL
          600       610       620       630       640       650    

     120       130       140       150       160       170         
KIAA17 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAAEH
          660       670       680       690       700       710    

     180       190       200       210       220       230         
KIAA17 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAKGNPIHARGKVPPH
          720       730       740       750       760       770    

     240       250       260       270       280       290         
KIAA17 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVVS
          780       790       800       810       820       830    

     300       310       320       330       340       350         
KIAA17 HGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAPEFFTD
       ::::                            ::::::::::::::::::::::::::::
gi|119 HGAQ----------------------------FRVVVLSTVHTCQSLLSPGALAPEFFTD
                                      840       850       860      

     360       370       380       390       400       410         
KIAA17 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPEGLSMEQVEQG
        870       880       890       900       910       920      

     420       430       440       450       460       470         
KIAA17 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VAQRRRWPPRGTQAGAAGNWEAAPEPVGDLAEEQAAVVTAMVKAEPGDEALSPASRDITA
        930       940       950       960       970       980      

     480       490       500       510       520       530         
KIAA17 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAEADFWPWDGELNADDAI
        990      1000      1010      1020      1030      1040      

     540       550       560       570       580       590         
KIAA17 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPPAALRKLLRAEPERYRHCSF
       1050      1060      1070      1080      1090      1100      

     600       610       620       630       640       650         
KIAA17 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQLLSGDKAPEGRLRGRVLGV
       1110      1120      1130      1140      1150      1160      

     660       670       680       690       700       710         
KIAA17 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELKDPSQVPIYSLRKGRLQRVGLER
       1170      1180      1190      1200      1210      1220      

     720       730       740       750       760       770         
KIAA17 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEASTWEQGLRILGLEYSLRVPPSDQA
       1230      1240      1250      1260      1270      1280      

     780       790       800       810       820       830         
KIAA17 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACNLDDALSVRDLGPRCEVAVHITD
       1290      1300      1310      1320      1330      1340      

     840       850       860       870       880       890         
KIAA17 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLCQDVLSLLPGRDRLAISLFLTME
       1350      1360      1370      1380      1390      1400      

     900       910       920       930       940       950         
KIAA17 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KASGQLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGAGRELPARLDSVDACVVAACYFSR
       1410      1420      1430      1440      1450      1460      

     960       970       980       990      1000      1010         
KIAA17 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRW
       1470      1480      1490      1500      1510      1520      

    1020      1030      1040      1050      1060      1070         
KIAA17 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQD
       1530      1540      1550      1560      1570      1580      

    1080      1090      1100      1110      1120      1130         
KIAA17 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 YEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSP
       1590      1600      1610      1620      1630      1640      

    1140      1150      1160      1170      1180      1190         
KIAA17 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLK
       1650      1660      1670      1680      1690      1700      

    1200      1210      1220      1230      1240      1250         
KIAA17 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLL
       1710      1720      1730      1740      1750      1760      

    1260      1270      1280      1290      1300      1310         
KIAA17 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 WRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEAS
       1770      1780      1790      1800      1810      1820      

    1320      1330      1340      1350      1360      1370         
KIAA17 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLE
       1830      1840      1850      1860      1870      1880      

    1380      1390      1400      1410      1420      1430         
KIAA17 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE
       1890      1900      1910      1920      1930      1940      

    1440      1450      1460      1470      1480      1490         
KIAA17 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLN
       ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
gi|119 ASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLN
       1950      1960      1970      1980      1990      2000      

    1500      1510      1520      1530      1540      1550         
KIAA17 VDPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
       ::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|119 VDPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELL
       2010      2020      2030      2040      2050      2060      

    1560      1570      1580      1590      1600      1610         
KIAA17 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLN
       ::::::::::::::::::::::::::::::::::::::                      
gi|119 PKQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCR----------------------
       2070      2080      2090      2100                          

    1620      1630      1640      1650      1660      1670         
KIAA17 PSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
                               ::::::::::::::::::::::::::::::::::::
gi|119 ------------------------GKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGP
                                 2110      2120      2130      2140

    1680      1690      1700      1710      1720      1730         
KIAA17 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 CILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRP
             2150      2160      2170      2180      2190      2200

    1740      1750      1760      1770      1780      1790         
KIAA17 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRH
             2210      2220      2230      2240      2250      2260

    1800      1810      1820      1830      1840      1850         
KIAA17 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRP
             2270      2280      2290      2300      2310      2320

    1860      1870      1880      1890      1900      1910         
KIAA17 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VVKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPP
             2330      2340      2350      2360      2370      2380

    1920      1930      1940      1950      1960      1970         
KIAA17 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVE
       ::::::::::::::::::::::::::::::::::::::::::::::              
gi|119 SVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEV--------------
             2390      2400      2410      2420                    

    1980      1990      2000      2010      2020      2030         
KIAA17 PQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
                          :::::::::::::::::::::::::::::::::::::::::
gi|119 -------------------ALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQ
                          2430      2440      2450      2460       

    2040      2050      2060      2070      2080      2090         
KIAA17 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLV
      2470      2480      2490      2500      2510      2520       

    2100      2110    
KIAA17 PAGQVRVCRRPTMPS
       :::::::::::::::
gi|119 PAGQVRVCRRPTMPS
      2530      2540  

>>gi|18676690|dbj|BAB84997.1| FLJ00244 protein [Homo sap  (1124 aa)
 initn: 7675 init1: 7675 opt: 7675  Z-score: 8291.7  bits: 1547.0 E():    0
Smith-Waterman score: 7675;  99.822% identity (99.911% similar) in 1124 aa overlap (991-2114:1-1124)

              970       980       990      1000      1010      1020
KIAA17 LRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQFNRLVAEFLVGSECTRTVTPLRWQ
                                     ::::::::::::::::::::::::::::::
gi|186                               KEYMIQFNRLVAEFLVGSECTRTVTPLRWQ
                                             10        20        30

             1030      1040      1050      1060      1070      1080
KIAA17 PAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 PAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDY
               40        50        60        70        80        90

             1090      1100      1110      1120      1130      1140
KIAA17 EQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 EQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPI
              100       110       120       130       140       150

             1150      1160      1170      1180      1190      1200
KIAA17 RRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFSLQHALAQSYQRRARSLHLAVQLKA
              160       170       180       190       200       210

             1210      1220      1230      1240      1250      1260
KIAA17 QPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 QPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEHPHALAGRPGLRLLW
              220       230       240       250       260       270

             1270      1280      1290      1300      1310      1320
KIAA17 RRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQLLELVELQRWPEAAALIQEKGEASQ
              280       290       300       310       320       330

             1330      1340      1350      1360      1370      1380
KIAA17 RRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSLQHGFLVPSPQLWTVAPGFSLCLEH
              340       350       360       370       380       390

             1390      1400      1410      1420      1430      1440
KIAA17 VERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWEA
              400       410       420       430       440       450

             1450      1460      1470      1480      1490      1500
KIAA17 SRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLLAPTASPRPGPSSLGPGLNV
       :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
gi|186 SRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIRLEGLPAPTASPRPGPSSLGPGLNV
              460       470       480       490       500       510

             1510      1520      1530      1540      1550      1560
KIAA17 DPGTYTWVAHGQTEDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLP
       :::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|186 DPGTYTWVAHGQTQDWDQERRADRQEAPRRVHLFVHHMGMEKVPEEVLRPGTLFTVELLP
              520       530       540       550       560       570

             1570      1580      1590      1600      1610      1620
KIAA17 KQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 KQLPDLRKEEAVRGLEEASPLVTSIALGRPVPQPLCRVIPSRFLERQTYNIPGGRHKLNP
              580       590       600       610       620       630

             1630      1640      1650      1660      1670      1680
KIAA17 SQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPC
              640       650       660       670       680       690

             1690      1700      1710      1720      1730      1740
KIAA17 ILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 ILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPN
              700       710       720       730       740       750

             1750      1760      1770      1780      1790      1800
KIAA17 QSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 QSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHE
              760       770       780       790       800       810

             1810      1820      1830      1840      1850      1860
KIAA17 VILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPV
              820       830       840       850       860       870

             1870      1880      1890      1900      1910      1920
KIAA17 VKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VKNERLQNLGLDRSLFERYHEDAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPS
              880       890       900       910       920       930

             1930      1940      1950      1960      1970      1980
KIAA17 VLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEP
              940       950       960       970       980       990

             1990      2000      2010      2020      2030      2040
KIAA17 QDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 QDIAVLTPYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQR
             1000      1010      1020      1030      1040      1050

             2050      2060      2070      2080      2090      2100
KIAA17 PTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 PTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVP
             1060      1070      1080      1090      1100      1110

             2110    
KIAA17 AGQVRVCRRPTMPS
       ::::::::::::::
gi|186 AGQVRVCRRPTMPS
             1120    

>>gi|109469346|ref|XP_230961.4| PREDICTED: similar to Pe  (2885 aa)
 initn: 8711 init1: 2138 opt: 7391  Z-score: 7979.1  bits: 1490.5 E():    0
Smith-Waterman score: 9762;  68.871% identity (86.538% similar) in 2117 aa overlap (13-2114:792-2885)

                                 10        20         30        40 
KIAA17                   LTSDSQTRAVLRGSSAGHTVGALA-DSTEAPSKKPMSSSPSR
                                     :..  .:..  : . .. :  : .  . . 
gi|109 HKQKLAVGLIAGRRPEGSKHIPPLLIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTN
             770       780       790       800       810       820 

              50        60        70        80        90       100 
KIAA17 SAADIYIREYFHSHVSGGHPEATPLRVMYTDRPLSQTDPVTLQYCCLTDDRQAFRPPTRA
       ::::::.:::::..:..:: ::.::::::.:::  ::: .::::::::.:::::::::  
gi|109 SAADIYVREYFHGYVNSGHQEAAPLRVMYADRPPRQTDSTTLQYCCLTEDRQAFRPPTFP
             830       840       850       860       870       880 

             110       120       130       140       150       160 
KIAA17 ELARHRVVVTTTSQARELRVPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDH
       :: :::.:::::::::::.::.::::::.::::::::::::: ::.::   ::.::::::
gi|109 ELLRHRLVVTTTSQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDH
             890       900       910       920       930       940 

             170       180       190       200       210       220 
KIAA17 MQVTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRH
       :::::::::: : .:: : ::::::: ::::.:..:..::.::::::: : ::..:.:::
gi|109 MQVTPRLFSVPRDKAAGHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSRH
             950       960       970       980       990      1000 

             230       240       250       260       270       280 
KIAA17 FYVAKGNPIHARGKVPPHPRHYPLMFCHVAGNPDRDMSMASWLNLAEIAQVVEKVQEAYN
       :::::::::.: :::: ::.:::::::::::.:..::: .:::: ::..:::::::: ::
gi|109 FYVAKGNPIQASGKVPRHPQHYPLMFCHVAGSPEQDMSRTSWLNSAEVTQVVEKVQEIYN
            1010      1020      1030      1040      1050      1060 

             290       300       310       320       330       340 
KIAA17 TWPSCWGGREQRCICVVSHGAQVSALRQELRRRDLGQVSVGSFEILPGRQFRVVVLSTVH
       ::: ::: :::: ::.:::::::::::::::::.::.::::::::::::.:::::::.::
gi|109 TWPHCWGPREQRHICAVSHGAQVSALRQELRRRNLGEVSVGSFEILPGREFRVVVLSSVH
            1070      1080      1090      1100      1110      1120 

             350       360       370       380       390       400 
KIAA17 TCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECV
       . .::::::: . ::::. ::::::.::::::::.::::::::: ::: :::..:::::.
gi|109 NRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRKLWKNFIRECI
            1130      1140      1150      1160      1170      1180 

             410       420       430       440        450       460
KIAA17 ERHSVCPEGLSMEQVEQGVAQRRRWPPRGTQAGAAGNWEAAPEPVG-DLAEEQAAVVTAM
       :.::. :: ::.::.:::::::. :   ..    : . ::  .:.. :: .  :  . . 
gi|109 EHHSIFPEDLSLEQIEQGVAQRQNW---ASLMLRAWDTEAEHKPTAQDLQRPIAEGTMVT
            1190      1200         1210      1220      1230        

              470       480       490       500       510       520
KIAA17 VKAEPGDEALSPASRDITATTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAE
       ::::         .:  .:.::::::.:  :: .....   .: . .:: .. .:. : :
gi|109 VKAE---------TRARAAATAQTEAVA--AGGTARRN---SASTDAAAEVSTLEGYE-E
     1240               1250        1260         1270      1280    

              530       540       550       560       570       580
KIAA17 DAEADFWPWDGELNADDAILRELLDESQKVMVTVGEDGLLDTVARPESLQQARLYENLPP
       :.:.:.:: : :::::::::.::::::... ::: :::::::.. : : :.:: : ::: 
gi|109 DSESDLWPSDWELNADDAILKELLDESRQMTVTVREDGLLDTMVCPASSQKARQYINLPS
          1290      1300      1310      1320      1330      1340   

              590       600       610       620       630       640
KIAA17 AALRKLLRAEPERYRHCSFVPETFERASAIPLDDASSGPIQVRGRLDCGMAFAGDEVLVQ
       .:::: :: .:..::.:::. :::::: : :::: .:.::::::::.:::::.:::::::
gi|109 SALRKYLRLDPKQYRRCSFLQETFERALATPLDDMASSPIQVRGRLNCGMAFTGDEVLVQ
          1350      1360      1370      1380      1390      1400   

                 650       660       670       680       690       
KIAA17 LLS---GDKAPEGRLRGRVLGVLKRKRHELAFVCRMDTWDPRIMVPINGSVTKIFVAELK
       .:.    ::.  : : :::.:::::.:.::::::::: :::.::.:::.:::::::: ::
gi|109 ILGPAVDDKSIPGSLLGRVMGVLKRRRRELAFVCRMDEWDPHIMIPINSSVTKIFVAGLK
          1410      1420      1430      1440      1450      1460   

       700       710       720       730       740       750       
KIAA17 DPSQVPIYSLRKGRLQRVGLERLTAEARHSRLFWVQIVLWRQGFYYPLGIVREVLPEAST
       ::.::::. : .:....:  : :  : : .:::::.:::::. :::::::: ::::.: :
gi|109 DPQQVPIHCLIEGKVKHVRHETLKREDRSTRLFWVRIVLWRERFYYPLGIVLEVLPKAVT
          1470      1480      1490      1500      1510      1520   

       760       770       780       790       800       810       
KIAA17 WEQGLRILGLEYSLRVPPSDQATITKVLQKYHTELGRVAGRREDCRAFLTFTVDPQGACN
       :::::.:: ::..:..   : :...:.:::::.:.  .:..::: : :::::::::::::
gi|109 WEQGLHILDLEHGLKAHTPDPASVSKALQKYHSEIDMAASHREDYRRFLTFTVDPQGACN
          1530      1540      1550      1560      1570      1580   

       820       830       840       850       860       870       
KIAA17 LDDALSVRDLGPRCEVAVHITDVASFVPRDGVLDVEARRQGAAFYAPGREPVPMLPASLC
       ::::::::::::  ::::::.::::.::.::.::::::.::..::::.:::: :::::::
gi|109 LDDALSVRDLGPVYEVAVHIADVASLVPKDGALDVEARQQGTVFYAPSREPVLMLPASLC
          1590      1600      1610      1620      1630      1640   

       880       890       900        910       920       930      
KIAA17 QDVLSLLPGRDRLAISLFLTMEKASG-QLKSLRFAPSVVQSDRQLSYEEAEEVIRQHPGA
       :..::::::.:::::::::::::..: :..:::::::.:.::::::::::::.:..::::
gi|109 QEALSLLPGQDRLAISLFLTMEKGGGGQIRSLRFAPSIVRSDRQLSYEEAEELIKRHPGA
          1650      1660      1670      1680      1690      1700   

        940       950       960       970       980       990      
KIAA17 GRELPARLDSVDACVVAACYFSRLLRRHRLRSDCFYEQPDEDGTLGFRAAHIMVKEYMIQ
       : .:::.::::.:::::::::: .:::.:: .::.:: ::::..::::.:::::.:::::
gi|109 GLKLPAHLDSVEACVVAACYFSWMLRRQRLPADCYYEPPDEDSVLGFRTAHIMVQEYMIQ
          1710      1720      1730      1740      1750      1760   

       1000      1010      1020      1030      1040      1050      
KIAA17 FNRLVAEFLVGSECTRTVTPLRWQPAPRSQQLKALCEKHGDRVPLSLHLGHHLHGGGGSP
       ::  :::::::.. :.:.:::::::.:  ::: .. .::   ::::::: ::  ..    
gi|109 FNSRVAEFLVGDKHTQTLTPLRWQPTPSRQQLDSVFKKHRGLVPLSLHLCHH--SNTHYT
          1770      1780      1790      1800      1810        1820 

       1060      1070      1080      1090      1100      1110      
KIAA17 PDTRLHLLASLWKQVQFAARTQDYEQMVDLVTTDDMHPFLAPAGRDLRKALERSAFGRCA
       :. ::.::.:::::::.:: :.:: :::::..:.:::: ::::  :.:.:: ::.::: .
gi|109 PNKRLYLLTSLWKQVQLAAGTRDYSQMVDLIATEDMHPSLAPACLDFRRALGRSVFGRSS
            1830      1840      1850      1860      1870      1880 

       1120      1130      1140      1150      1160      1170      
KIAA17 RGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARDIDGLCQAFS
       .:.:. .:::::::::::::.::::::::::::: ::::::: .:.:: :::::::: ::
gi|109 QGRQRPAGHYSLQVDWYTWASSPIRRYLDVVLQRLILLALGHKSSTYSNRDIDGLCQDFS
            1890      1900      1910      1920      1930      1940 

       1180      1190      1200      1210      1220      1230      
KIAA17 LQHALAQSYQRRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPV
        :.: :::::::: :::::.:::.:: .:::::::::.:.:::..::: ::::::::::.
gi|109 RQYACAQSYQRRACSLHLAIQLKTQPQNKLGFVVDVETGARCFKVLFPINRETLPDPCPI
            1950      1960      1970      1980      1990      2000 

       1240      1250      1260      1270      1280      1290      
KIAA17 PYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTVPDPHTLAVETALWKQL
        : ::::::.:. :.:. ::::.::::.::.:.:. :::  ::  :: : ....::: .:
gi|109 HYHSLQLAENPEELVGQTGLRLVWRRRTYSVQASKLPLPHLGTSFDPLTQTIDAALWMKL
            2010      2020      2030      2040      2050      2060 

       1300      1310      1320      1330      1340      1350      
KIAA17 LELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLEVARELGSGDTLQVQLGTSL
       : :.. .::::.::::::. . :..:: .::..:.::::.::: :::::::::::::.::
gi|109 LVLLKEERWPEVAALIQEQDKLSRQREKAQVHQSRCGHFIEVAYELGSGDTLQVQLGSSL
            2070      2080      2090      2100      2110      2120 

       1360      1370      1380      1390      1400      1410      
KIAA17 QHGFLVPSPQLWTVAPGFSLCLEHVERPGDCFSGRVYRAPRDRYRDVDEYACVWEPFCAL
       :.:::.:. :::::.:::::::::.:::::::::.:..  .:.: .:..:. :: : :::
gi|109 QRGFLAPTLQLWTVVPGFSLCLEHMERPGDCFSGHVHQPLQDQYLEVSQYSGVWGPRCAL
            2130      2140      2150      2160      2170      2180 

       1420      1430      1440      1450      1460      1470      
KIAA17 ESATGAVAENDSVTLQHLSVSWEASRTPQGQLQGAFRLEAAFLEENCADINFSCCYLCIR
       ::  .:::::::..:: . . :..:   : ::::.:.::::::.:.: .:.:.:::::::
gi|109 ESLMSAVAENDSIVLQDVHIYWDTS---QEQLQGTFQLEAAFLQEKCINIHFGCCYLCIR
            2190      2200         2210      2220      2230        

       1480      1490      1500      1510              1520        
KIAA17 LEGLLAPTASPRPGPSSLGPGLNVDPGTYTWVAHGQTEDWD--------QERRADRQEAP
       ::::  : ::  ::::.::: ::.::.:::::::: . :::        ::   ::::.:
gi|109 LEGLPLPLASSLPGPSDLGPFLNIDPNTYTWVAHGLSGDWDHELAGDWDQECVDDRQEVP
     2240      2250      2260      2270      2280      2290        

     1530      1540      1550      1560      1570      1580        
KIAA17 RRVHLFVHHMGMEKVPEEVLRPGTLFTVELLPKQLPDLRKEEAVRGLEEASPLVTSIALG
       ..::.:.::: :::::::::::.: ::::.: :::::::::::::::..::::: :::::
gi|109 KQVHFFIHHMTMEKVPEEVLRPSTRFTVEVLSKQLPDLRKEEAVRGLKNASPLVISIALG
     2300      2310      2320      2330      2340      2350        

     1590      1600      1610      1620      1630      1640        
KIAA17 RPVPQPLCRVIPSRFLERQTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIV
        :. .: : :  ::::::..::::::.:::: ::. ::: ::.: :::::::::::::.:
gi|109 LPILEPHCPVPTSRFLERKNYNIPGGHHKLNQSQDKAVRSALQKQFTVIQGPPGTGKTVV
     2360      2370      2380      2390      2400      2410        

     1650      1660      1670      1680      1690      1700        
KIAA17 GLHIVFWFHKSNQEQVQPGGPPRGEKRLGGPCILYCGPSNKSVDVLAGLLLRR-MELKPL
       :.:::.:::.:::::.  :. :  :..:::::.:::::::::::::.:::::.  :..::
gi|109 GFHIVYWFHRSNQEQMPTGSSPSEEEKLGGPCVLYCGPSNKSVDVLGGLLLRKKTEMRPL
     2420      2430      2440      2450      2460      2470        

      1710      1720      1730      1740      1750      1760       
KIAA17 RVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFD
       :::.:::::.:::.: :..:.:. :  .::::::::::::::::::::::::..::. ::
gi|109 RVYGEQAEATEFPLPGVSNRSLFGKISQEGRPNQSLRSITLHHRIRQAPNPYAAEIRKFD
     2480      2490      2500      2510      2520      2530        

      1770      1780      1790      1800      1810      1820       
KIAA17 TRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILCTCSCAASASLKILDVRQILVDEA
       ..:..:..::..::. :..:: .:::.::.:: :::::::::::.::: :.:::::.:::
gi|109 AQLREGKIFSKDDLLVYRRVLGKARKYELERHSVILCTCSCAASGSLKALNVRQILIDEA
     2540      2550      2560      2570      2580      2590        

      1830      1840      1850      1860      1870      1880       
KIAA17 GMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHEDAHMLD
       ::::::::::::: : ..:::::::::::::::::::.:.:::.:::::::::.:: :::
gi|109 GMATEPETLIPLVCFSKTEKVVLLGDHKQLRPVVKNEQLRNLGMDRSLFERYHRDAIMLD
     2600      2610      2620      2630      2640      2650        

      1890      1900      1910      1920      1930      1940       
KIAA17 TQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVS
       ::::::. ::.:::. :: .:::::. :.::::.:::.::.::::::: :::.:..::::
gi|109 TQYRMHKDICSFPSMEFYGGKLKTWSDLKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVS
     2660      2670      2680      2690      2700      2710        

      1950      1960      1970      1980      1990      2000       
KIAA17 TDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAG
       :.::::::.:: :::.::::: ::::: :::.:.:.::::::::::. ::..: ..:..:
gi|109 TEEGNENSRANPEEVTEVVRIIKQLTLDRTVDPKDVAVLTPYNAQAAAISRGLMQRGVTG
     2720      2730      2740      2750      2760      2770        

      2010      2020      2030      2040      2050      2060       
KIAA17 VAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQ
       :.:.:::::::::::::.::::::: .::.:::::::::::::::::::.:::::.::::
gi|109 VTVTSITKSQGSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQ
     2780      2790      2800      2810      2820      2830        

      2070      2080      2090      2100      2110    
KIAA17 EGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVCRRPTMPS
       ::::.:::::::::::::. :: :::::..:::: .::: :. .. :
gi|109 EGLCIIGDHLLLRCCPLWHRLLGFCEAQNSLVPAERVRVQRKSALSS
     2840      2850      2860      2870      2880     




2114 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (8 proc)
 start: Thu Mar  5 17:10:16 2009 done: Thu Mar  5 17:15:30 2009
 Total Scan time: 2452.730 Total Display time:  3.520

Function used was FASTA [version 34.26.5 April 26, 2007]