hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12074362/chunk_1/iprscan-20080502-12074362.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1765
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 373.6   1.2e-107   1
SM00219                                                  50.0    3.1e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     316   573 ..     1   280 []    50.0  3.1e-14
SM00220    1/1     316   573 ..     1   231 []   373.6 1.2e-107

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 316 to 573: score 50.0, E = 3.1e-14
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda....keeFlrE
                       + g+++G G+F +V +++ +++++  A K + ++  ++++ +  +E
    KIAA1765   316    YETGRVIGDGNFAVVKECRHRetrQAYAMKIIDKSRlkgkEDMVDSE 362  

                   akiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyL
                   + i  +l  +HpNiVkL+ v  ++         +++++Ey+ gGdL d +
    KIAA1765   363 ILIIQSL--SHPNIVKLHEVYETD-------MEIYLILEYVQGGDLFDAI 403  

                   rknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk...
                    ++ + ++ +d   +  + +k   + ++k +vHRDL   N Lv +n +++
    KIAA1765   404 IESVK-FPEPDAALMIMDLCKALVHMHDKSIVHRDLKPENLLVQRNEdks 452  

                   .vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslk
                   ++ K +DFGL++ +             ++    +g         APE l 
    KIAA1765   453 tTLKLADFGLAKHVVRP--------IFTV----CGTP----TYVAPEILS 486  

                   dgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyR
                   ++ +  + D W+ GV L+ i+  G +P   ++    + +e+++ ++ G+ 
    KIAA1765   487 EKGYGLEVDMWAAGVILY-ILLCGFPPFRSPE---RDQDELFNIIQLGHF 532  

                   lpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                      P++         +d+  dl ++    dP++R t  ++ ++  +   
    KIAA1765   533 EFLPPY-----WDNISDAAKDLVSRLLVVDPKKRYTAHQVlqHPWI    573  

SM00220: domain 1 of 1, from 316 to 573: score 373.6, E = 1.2e-107
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik........erilrE
                      Ye ++++G G F++V+ +r+++t + +A+K+i++++ +++++++ +E
    KIAA1765   316    YETGRVIGDGNFAVVKECRHRETRQAYAMKIIDksrlkgkeDMVDSE 362  

                   ikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrrg
                   i i ++  HPNIVkL++v+e++ ++yl++Ey+ G  GdLfd + +  +  
    KIAA1765   363 ILIIQSlSHPNIVKLHEVYETdMEIYLILEYVQG--GDLFDAIIESVK-- 408  

                   lrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds......h
                       ++E++a+ ++  +++aL ++H++ I+HRDLKPeN+L+ ++++++++
    KIAA1765   409 ----FPEpDAALMIMDLCKALVHMHDKSIVHRDLKPENLLVQRnedkstT 454  

                   vKlaDFGlArql....ttfvGTpeYmAPEvl...gYgkpavDiWSlGcil
                   +KlaDFGlA+++ ++  t++GTp Y+APE+l+++gYg  +vD+W+ G+il
    KIAA1765   455 LKLADFGLAKHVvrpiFTVCGTPTYVAPEILsekGYGL-EVDMWAAGVIL 503  

                   yElltGkpPFp....qldlifkkig..............SpeakdLikkl
                   y+ll+G pPF+++++++d++f++i  ++ +  ++++++ S+ akdL+++l
    KIAA1765   504 YILLCGFPPFRsperDQDELFNIIQlghfeflppywdniSDAAKDLVSRL 553  

                   LvkdPekRlta.eaLedeldikaHPff<-*
                   Lv+dP+kR+ta+++L+       HP++   
    KIAA1765   554 LVVDPKKRYTAhQVLQ-------HPWI    573  

//