hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-12074362/chunk_1/iprscan-20080502-12074362.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1765 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 362.3 7.3e-106 1 PF00069.15.fs Protein kinase domain 360.4 2.7e-105 1 PF07714.7.fs Protein tyrosine kinase 80.1 3.8e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 316 573 .. 1 287 [] 360.4 2.7e-105 PF07714.7.fs 1/1 316 464 .. 1 161 [. 80.1 3.8e-23 PF00069.15.ls 1/1 316 573 .. 1 287 [] 362.3 7.3e-106 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 316 to 573: score 360.4, E = 2.7e-105 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ye+++++G G+f++V++++h+ t++ +A+Kii+k++ k k+d+ + KIAA1765 316 YETGRVIGDGNFAVVKECRHRETRQAYAMKIIDKSRLKGKEDMVD-- 360 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse sEi i ++LsHpNIv+l++v+e++ ++yl+lEy++gG dLfd++ KIAA1765 361 -SEILIIQSLSHPNIVKLHEVYETDMEIYLILEYVQGG----DLFDAII- 404 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ ++ +e +a ++ ++++l ++H+++i+HRDLKPeN+L+ +n + KIAA1765 405 --ESVKF--PEPDAALMIMDLCKALVHMHDKSIVHRDLKPENLLVQRNED 450 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD +++lK+aDFGlAk + + + t++GTp Y+APE+l +gyg +vD KIAA1765 451 KSTTLKLADFGLAK---HvVRPiF-TVCGTPTYVAPEILS-EKGYGLEVD 495 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +W++Gvily+ll+G pPF++ ++dq++l+ i + +ef p+wd+i KIAA1765 496 MWAAGVILYILLCGFPPFRSP---ERDQDELFNIIQLGHFEFLPPYWDNI 542 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* s ++akdL++++L +DP+kR+ta+++lqHPw+ KIAA1765 543 S-----------DAAKDLVSRLLVVDPKKRYTAHQVLQHPWI 573 PF07714.7.fs: domain 1 of 1, from 316 to 464: score 80.1, E = 3.8e-23 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie + g+++G G+F +V +++ + +t++ A K++ + ++ + KIAA1765 316 YETGRVIGDGNFAVVKECRHR----ETRQAYAMKII-D-KSRLKG-- 354 redFlr.EAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +ed+ +E+ i +l +HpNiV+L+ v + e +y+++Ey++gGd KIAA1765 355 KEDMVDsEILIIQSL-SHPNIVKLHEVYETDME-----IYLILEYVQGGD 398 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d + +++ +d + ++ +k++ + ++k +vHRDL N LV KIAA1765 399 LFDAIIE---SVKFPEPDAALMIMDLCKALVHMHDKSIVHRDLKPENLLV 445 se....nlvVKIsDFGLaR<-* ++++++ + K +DFGLa+ KIAA1765 446 QRnedkSTTLKLADFGLAK 464 PF00069.15.ls: domain 1 of 1, from 316 to 573: score 362.3, E = 7.3e-106 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr ye+++++G G+f++V++++h+ t++ +A+Kii+k++ k k+d+ + KIAA1765 316 YETGRVIGDGNFAVVKECRHRETRQAYAMKIIDKSRLKGKEDMVD-- 360 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse sEi i ++LsHpNIv+l++v+e++ ++yl+lEy++gG dLfd++ KIAA1765 361 -SEILIIQSLSHPNIVKLHEVYETDMEIYLILEYVQGG----DLFDAII- 404 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv ++ ++ +e +a ++ ++++l ++H+++i+HRDLKPeN+L+ +n + KIAA1765 405 --ESVKF--PEPDAALMIMDLCKALVHMHDKSIVHRDLKPENLLVQRNED 450 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD +++lK+aDFGlAk + + + t++GTp Y+APE+l +gyg +vD KIAA1765 451 KSTTLKLADFGLAK---HvVRPiF-TVCGTPTYVAPEILS-EKGYGLEVD 495 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +W++Gvily+ll+G pPF++ ++dq++l+ i + +ef p+wd+i KIAA1765 496 MWAAGVILYILLCGFPPFRSP---ERDQDELFNIIQLGHFEFLPPYWDNI 542 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* s ++akdL++++L +DP+kR+ta+++lqHPw+ KIAA1765 543 S-----------DAAKDLVSRLLVVDPKKRYTAHQVLQHPWI 573 //