hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12060690/chunk_1/iprscan-20080502-12060690.nocrc
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Query sequence: KIAA1764
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00365                                                  44.2    1.7e-08   3

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00365      1/3      61    82 ..     1    22 []    23.1    0.038
SM00365      2/3      83   104 ..     1    22 []    19.1     0.61
SM00365      3/3     131   152 ..     1    22 []     2.0  4.7e+02

Alignments of top-scoring domains:
SM00365: domain 1 of 3, from 61 to 82: score 23.1, E = 0.038
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                        nL++LdLs+N+I+ iE+L++   
    KIAA1764    61    IWNLQHLDLSSNQISRIEGLNT    82   

SM00365: domain 2 of 3, from 83 to 104: score 19.1, E = 0.61
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                      Lt+L +L Ls N+I+k+E+L+e   
    KIAA1764    83    LTKLYTLNLSCNLITKVEGLEE    104  

SM00365: domain 3 of 3, from 131 to 152: score 2.0, E = 4.7e+02
                   *->LtnLeeLdLsqNkIkkiENLde<-*
                       ++L+++dL +N+I +i  L +   
    KIAA1764   131    KHKLRYIDLHSNRIDSIHHLLQ    152  

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