hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11470309/chunk_1/iprscan-20080502-11470309.nocrc
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Query sequence: KIAA1753
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00356                                                  90.6    1.9e-22   5

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00356     1/5      93   120 ..     1    31 []    24.8    0.012
SM00356     2/5     132   161 ..     1    31 []     2.7       50
SM00356     3/5     223   248 ..     1    31 []    15.4      1.3
SM00356     4/5     259   292 ..     1    31 []    20.4     0.25
SM00356     5/5     301   328 ..     1    31 []    27.3   0.0022

Alignments of top-scoring domains:
SM00356: domain 1 of 5, from 93 to 120: score 24.8, E = 0.012
                   *->kyktelCkfF.arrGppgyCpyGdrCkfaHpl<-*
                      ++  + C ++++++G    Cp Gd+C+f+H     
    KIAA1753    93    SPD-VYCTKYdEATG---LCPEGDECPFLHRT    120  

SM00356: domain 2 of 5, from 132 to 161: score 2.7, E = 50
                   *->kyktelCkfF..arrGppgyCpyGd.rCkfaHpl<-*
                       ykt +C   ++  +G   +C ++  +C faH++   
    KIAA1753   132    YYKTGICI-HetDSKG---NCTKNGlHCAFAHGP    161  

SM00356: domain 3 of 5, from 223 to 248: score 15.4, E = 1.3
                   *->kyktelCkfFarrGppgyCpyGdrCkfaHpl<-*
                      +ykte+Ck+      p+ C+ G  C++ H+    
    KIAA1753   223    NYKTEPCKKP-----PRLCRQGYACPYYHNS    248  

SM00356: domain 4 of 5, from 259 to 292: score 20.4, E = 0.25
                   *->kyktelCkfFarrGp....pgyCpyGdrCkfaHpl<-*
                      ky+  +C++  ++G + ++pg C  Gd C++ H +   
    KIAA1753   259    KYRSSPCPNV-KHGDewgdPGKCENGDACQYCHTR    292  

SM00356: domain 5 of 5, from 301 to 328: score 27.3, E = 0.0022
                   *->kyktelCkfFarrGppgyCpyGdrCkfaHpl<-*
                       yk + C + ++ G    Cp+G+ C faH++   
    KIAA1753   301    IYKSTKCNDMQQSG---SCPRGPFCAFAHVE    328  

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