hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11365832/chunk_1/iprscan-20080502-11365832.nocrc
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Query sequence: KIAA1747
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00457                                                 193.7    1.8e-53   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00457    1/1      97   289 ..     1   232 []   193.7  1.8e-53

Alignments of top-scoring domains:
SM00457: domain 1 of 1, from 97 to 289: score 193.7, E = 1.8e-53
                   *->qflvardtVrvrlytvklde.sdlplaleFlkalrdLpdqynsansp
                      ++++ar++V++++ ++k+ ++++lpla+eF++++r L++++n +   
    KIAA1747    97    YREFARWKVNNLALERKDFFsLPLPLAPEFIRNIRLLGRRPNLQ--- 140  

                   dqayarfiddYGTHYitSatlGGeyslllvldkeslerkgwltsediskc
                    q  +++i++YGTH++ SatlGGe+sl++++dk++l rk   t+  ++++
    KIAA1747   141 -QVTENLIKKYGTHFLLSATLGGEESLTIFVDKQKLGRK---TETTGGAS 186  

                   lngeakvelassnlvagsvsaemkhctqssssskslstresqtvrlshtq
                   + g       s+n++a+s+++   h++++s++++++st +    rl+h+q
    KIAA1747   187 IIGG------SGNSTAVSLETL--HQLAASYFIDRESTLR----RLHHIQ 224  

                   vlGGaseaievledlergrkgclqsnsldfseWaesvpneaPvlidvksl
                   +++G   ai+v+e+++++    l+++++d+ ++++sv  + + + +v +l
    KIAA1747   225 IATG---AIKVTETRTGP----LGCSNYDNLDSVSSVLVQ-SPENKV-QL 265  

                   aPiyeLlpespfpvlvaleaspkreaLrqAlesYlk<-*
                    ++++Llpe+            +re ++ A++sY++   
    KIAA1747   266 LGLQVLLPEY------------LRERFVAAALSYIT    289  

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