hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11315209/chunk_1/iprscan-20080502-11315209.nocrc
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Query sequence: KIAA1744
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00343                                                  28.0     0.0013   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00343      1/1     809   825 ..     1    17 []    28.0   0.0013

Alignments of top-scoring domains:
SM00343: domain 1 of 1, from 809 to 825: score 28.0, E = 0.0013
                   *->kCynCGkeGHiardCpk<-*
                       CynCG  GH+a dC++   
    KIAA1744   809    SCYNCGVSGHYAQDCKQ    825  

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