hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11175044/chunk_1/iprscan-20080502-11175044.nocrc
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Query sequence: KIAA1736
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00400.22.fs WD domain, G-beta repeat                        56.0    8.3e-15   3
PF00400.22.ls WD domain, G-beta repeat                        57.7    3.6e-14   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00400.22.fs   2/3      91   130 ..     1    38 []    43.8  2.3e-11
PF00400.22.ls   1/2      91   130 ..     1    38 []    45.7  1.4e-10

Alignments of top-scoring domains:
PF00400.22.fs: domain 2 of 3, from 91 to 130: score 43.8, E = 2.3e-11
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      g+c+++l gH  t +cv f+p  + l+asg+ Dg ++iWd   
    KIAA1736    91    GKCVhSLiGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD    130  

PF00400.22.ls: domain 1 of 2, from 91 to 130: score 45.7, E = 1.4e-10
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      g+c+++l gH  t +cv f+p  + l+asg+ Dg ++iWd   
    KIAA1736    91    GKCVhSLiGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD    130  

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