hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11143125/chunk_1/iprscan-20080502-11143125.nocrc
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Query sequence: KIAA1734
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00212                                                  69.7    3.5e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00212    1/1     977  1134 ..     1   144 []    69.7  3.5e-16

Alignments of top-scoring domains:
SM00212: domain 1 of 1, from 977 to 1134: score 69.7, E = 3.5e-16
                   *->kRlqkElkelqkdpppgisaipvd.nlleWtvtIvGPpdTpYEgGvf
                      + ++kE++ l  + p+gi ++++++++  + ++I+GP  TpYE+G++
    KIAA1734   977    STVRKEMALLATSLPEGIMVKTFEdRMDLFSALIKGPTRTPYEDGLY 1023 

                   kltieFPedYPfkPPkvkFitk...iyHPNvdsssGeiCLdILk......
                    ++i +P  YP  PP ++ ++  ++  +PN +  +G++C + L +  +++
    KIAA1734  1024 LFDIQLPNIYPAVPPHFCYLSQcsgRLNPNLY-DNGKVCVSLLGtwigkg 1072 

                   .ekWsPaltletvLlsiqsLLnePnpdsPlnvdaaelyrk....dreefk
                   +e+W++  +l++vL+siq L    +p            ++++ +++  ++
    KIAA1734  1073 tERWTSKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQegyeNSRCYN 1122 

                   kkvrewtkkyae<-*
                   + +   + ++++   
    KIAA1734  1123 EMALIRVVQSMT    1134 

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