hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10483553/chunk_1/iprscan-20080502-10483553.nocrc
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Query sequence: KIAA1719
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                 462.7   1.8e-134   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/7      64   138 ..     1    80 []    56.6  3.2e-12
SM00228    2/7     163   241 ..     1    80 []    66.9  2.5e-15
SM00228    3/7     264   339 ..     1    80 []    59.7  3.6e-13
SM00228    4/7     472   552 ..     1    80 []    66.7  2.9e-15
SM00228    5/7     573   648 ..     1    80 []    71.3  1.2e-16
SM00228    6/7     671   745 ..     1    80 []    77.7  1.4e-18
SM00228    7/7     958  1030 ..     1    80 []    63.8  2.2e-14

Alignments of top-scoring domains:
SM00228: domain 1 of 7, from 64 to 138: score 56.6, E = 3.2e-12
                   *->gglGfsivg......gifvssvvpGspAakaGrkslglLkvGDvIle
                        lG++i+g++++++   vs++ pG+ Aa++      lL +GD I +
    KIAA1719    64    STLGLTISGgtdkdgKPRVSNLRPGGLAARSD-----LLNIGDYIRS 105  

                   VNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   VNG + ++ l+h+e++ llk+ g+     +v+L+v+++    
    KIAA1719   106 VNG-IHLTRLRHDEIITLLKNVGE-----RVVLEVEYEL    138  

SM00228: domain 2 of 7, from 163 to 241: score 66.9, E = 2.5e-15
                   *->gglGfsivg..........gifvssvvpGspAakaGrkslglLkvGD
                      +++Gf ++g+ +++++++++++ + v pG+pA++ G      LkvGD
    KIAA1719   163    NSFGFVLRGgahedghksrPLVLTYVRPGGPADREGS-----LKVGD 204  

                   vIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++l+V+G +++ g++h+ a++ l++++      +  + v+++    
    KIAA1719   205 RLLSVDG-IPLHGASHATALATLRQCSH-----EALFQVEYDV    241  

SM00228: domain 3 of 7, from 264 to 339: score 59.7, E = 3.6e-13
                   *->gglGfsivg.......gifvssvvpGspAakaGrkslglLkvGDvIl
                        lG+s++ ++ ++++ i + +++p s+ +++G      L++GD+Il
    KIAA1719   264    SALGISLTTtslrnksVITIDRIKPASVVDRSGA-----LHPGDHIL 305  

                   eVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +++G ts+e ++ +ea +ll + ++     kv+L++l+ +   
    KIAA1719   306 SIDG-TSMEHCSLLEATKLLASISE-----KVRLEILPVP    339  

SM00228: domain 4 of 7, from 472 to 552: score 66.7, E = 2.9e-15
                   *->gglGfsivg..........gifvssvvpGspAakaGrkslglLkvGD
                       g+G++++g+   +++ +++ +v+ ++p+spA+++G     lL+vGD
    KIAA1719   472    SGFGLQLQGgifatetlssPPLVCFIEPDSPAERCG-----LLQVGD 513  

                   vIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++l++NG + +e+ t eea +ll+ a       kv+L+v+ +    
    KIAA1719   514 RVLSING-IATEDGTMEEANQLLRDAAL---AHKVVLEVEFDV    552  

SM00228: domain 5 of 7, from 573 to 648: score 71.3, E = 1.2e-16
                   *->gglGfsivg.......gifvssvvpGspAakaGrkslglLkvGDvIl
                        lG++i++ ++++++++++s++++Gs+A++ G+     L +GD++l
    KIAA1719   573    VELGITISSasrkrgePLIISDIKKGSVAHRTGT-----LEPGDKLL 614  

                   eVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   ++++ + +++++ e+av++l+++ +      v+L++++++   
    KIAA1719   615 AIDN-IRLDNCPMEDAVQILRQCED-----LVKLKIRKDE    648  

SM00228: domain 6 of 7, from 671 to 745: score 77.7, E = 1.4e-18
                   *->gglGfsivg......gifvssvvpGspAakaGrkslglLkvGDvIle
                      g+lG++i+g++++ ++i++s++ + + A++ G      ++vGD+Il+
    KIAA1719   671    GPLGITISGteepfdPIVISGLTKRGLAERTGA-----IHVGDRILA 712  

                   VNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +N+ +s++g +  ea+ ll+ ag+     +vtL+++++    
    KIAA1719   713 INN-VSLKGRPLSEAIHLLQVAGE-----TVTLKIKKQL    745  

SM00228: domain 7 of 7, from 958 to 1030: score 63.8, E = 2.2e-14
                   *->gglGfsivg.....gifvssvvpGspAakaGrkslglLkvGDvIleV
                        +Gfs++++  ++g++v  v p++pA++ G      L++ D++l+V
    KIAA1719   958    HDFGFSVSDgllekGVYVHTVRPDGPAHRGG------LQPFDRVLQV 998  

                   NGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   N  + +++++   av ll +ag+     +++L++ R++   
    KIAA1719   999 NH-VRTRDFDCCLAVPLLAEAGD-----VLELIISRKP    1030 

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