# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/pf00323.fasta.nr -Q ../query/KIAA1718.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1718, 377 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826019 sequences Expectation_n fit: rho(ln(x))= 5.5225+/-0.000189; mu= 8.7307+/- 0.011 mean_var=89.7087+/-17.349, 0's: 33 Z-trim: 35 B-trim: 0 in 0/64 Lambda= 0.135412 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119604347|gb|EAW83941.1| hCG16420, isoform CRA_ ( 813) 2488 496.2 1e-137 gi|119604348|gb|EAW83942.1| hCG16420, isoform CRA_ ( 890) 2488 496.2 1.1e-137 gi|90111764|sp|Q6ZMT4.2|JHD1D_HUMAN RecName: Full= ( 941) 2488 496.2 1.2e-137 gi|109068428|ref|XP_001109325.1| PREDICTED: simila ( 941) 2380 475.1 2.6e-131 gi|194209960|ref|XP_001496558.2| PREDICTED: jumonj ( 956) 2252 450.1 8.9e-124 gi|47077508|dbj|BAD18641.1| unnamed protein produc ( 930) 2232 446.2 1.3e-122 gi|73978852|ref|XP_539885.2| PREDICTED: similar to (1083) 2223 444.5 4.9e-122 gi|119891400|ref|XP_599768.3| PREDICTED: similar t ( 881) 2208 441.5 3.2e-121 gi|13938093|gb|AAH07161.1| Jhdm1d protein [Mus mus ( 885) 1999 400.7 6.3e-109 gi|74200097|dbj|BAE22876.1| unnamed protein produc ( 889) 1999 400.7 6.4e-109 gi|90111765|sp|Q3UWM4.2|JHD1D_MOUSE RecName: Full= ( 940) 1999 400.7 6.6e-109 gi|74200141|dbj|BAE22890.1| unnamed protein produc ( 940) 1999 400.7 6.6e-109 gi|109473370|ref|XP_001069774.1| PREDICTED: simila ( 879) 1997 400.3 8.3e-109 gi|34365388|emb|CAE46011.1| hypothetical protein [ ( 403) 1480 299.0 1.2e-78 gi|149065301|gb|EDM15377.1| rCG28119 [Rattus norve ( 199) 1104 225.3 8.9e-57 gi|115312911|gb|AAI23961.1| Jumonji C domain conta ( 922) 738 154.3 9.4e-35 gi|117558014|gb|AAI27008.1| JHDM1D protein [Homo s ( 90) 597 126.0 3.2e-27 gi|189537431|ref|XP_001922089.1| PREDICTED: im:714 ( 342) 394 86.8 7.6e-15 gi|68359244|ref|XP_692914.1| PREDICTED: hypothetic ( 875) 297 68.2 7.8e-09 gi|189525254|ref|XP_709142.3| PREDICTED: PHD finge (1054) 203 49.9 0.003 gi|125852304|ref|XP_694899.2| PREDICTED: PHD finge (1037) 202 49.7 0.0034 gi|126336544|ref|XP_001379021.1| PREDICTED: simila (1048) 202 49.7 0.0034 >>gi|119604347|gb|EAW83941.1| hCG16420, isoform CRA_b [H (813 aa) initn: 2488 init1: 2488 opt: 2488 Z-score: 2628.5 bits: 496.2 E(): 1e-137 Smith-Waterman score: 2488; 99.735% identity (99.735% similar) in 377 aa overlap (1-377:437-813) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|119 SNLDILELHTREDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 410 420 430 440 450 460 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|119 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTRVKSELRSRSS 470 480 490 500 510 520 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS 530 540 550 560 570 580 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG 590 600 610 620 630 640 220 230 240 250 260 270 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS 650 660 670 680 690 700 280 290 300 310 320 330 KIAA17 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT 710 720 730 740 750 760 340 350 360 370 KIAA17 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 770 780 790 800 810 >>gi|119604348|gb|EAW83942.1| hCG16420, isoform CRA_c [H (890 aa) initn: 2488 init1: 2488 opt: 2488 Z-score: 2628.0 bits: 496.2 E(): 1.1e-137 Smith-Waterman score: 2488; 99.735% identity (99.735% similar) in 377 aa overlap (1-377:514-890) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|119 VLKRLEMCPWEEASIISKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 490 500 510 520 530 540 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|119 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTRVKSELRSRSS 550 560 570 580 590 600 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS 610 620 630 640 650 660 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG 670 680 690 700 710 720 220 230 240 250 260 270 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS 730 740 750 760 770 780 280 290 300 310 320 330 KIAA17 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT 790 800 810 820 830 840 340 350 360 370 KIAA17 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 850 860 870 880 890 >>gi|90111764|sp|Q6ZMT4.2|JHD1D_HUMAN RecName: Full=JmjC (941 aa) initn: 2488 init1: 2488 opt: 2488 Z-score: 2627.7 bits: 496.2 E(): 1.2e-137 Smith-Waterman score: 2488; 99.735% identity (99.735% similar) in 377 aa overlap (1-377:565-941) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|901 VLKRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 540 550 560 570 580 590 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|901 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTRVKSELRSRSS 600 610 620 630 640 650 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS 660 670 680 690 700 710 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG 720 730 740 750 760 770 220 230 240 250 260 270 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS 780 790 800 810 820 830 280 290 300 310 320 330 KIAA17 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT 840 850 860 870 880 890 340 350 360 370 KIAA17 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV ::::::::::::::::::::::::::::::::::::::::::::::: gi|901 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 900 910 920 930 940 >>gi|109068428|ref|XP_001109325.1| PREDICTED: similar to (941 aa) initn: 2380 init1: 2380 opt: 2380 Z-score: 2513.7 bits: 475.1 E(): 2.6e-131 Smith-Waterman score: 2380; 95.756% identity (98.143% similar) in 377 aa overlap (1-377:565-941) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|109 VLKRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 540 550 560 570 580 590 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS :::::::::::::::::::::::::::: : .::::.:::::::: ::: :::::::::: gi|109 ADQSLYTADSENEEDKRRTKKAKMKIEERSRIEGVENEESQKPLNRFFTRVKSELRSRSS 600 610 620 630 640 650 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::::::::::::::::. ::::::::::::::::::::::::::::::::::::::: gi|109 GYSDISESEDSGPECTALKNNFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS 660 670 680 690 700 710 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|109 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHS 720 730 740 750 760 770 220 230 240 250 260 270 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS :: :::::::: ::::::::::::::::::::::::::::::.:::::::::::.::::: gi|109 SNPEVRQLYRYHKPVECGYHVKTEDPDLRTSSWIKQFDTSRFNPQDLSRSQKCIKKEGSS 780 790 800 810 820 830 280 290 300 310 320 330 KIAA17 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT :::::::::::::::::::::::::::::::::.::.:::::::::::.::::::::::: gi|109 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGTCQLSNGSLSPERPVSETSFSVPLHPT 840 850 860 870 880 890 340 350 360 370 KIAA17 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 900 910 920 930 940 >>gi|194209960|ref|XP_001496558.2| PREDICTED: jumonji C (956 aa) initn: 1492 init1: 1492 opt: 2252 Z-score: 2378.4 bits: 450.1 E(): 8.9e-124 Smith-Waterman score: 2252; 90.476% identity (95.767% similar) in 378 aa overlap (1-377:579-956) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|194 VLRRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 550 560 570 580 590 600 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS :::::::::::::::::::::::::::: : .::.:.:::::::. ::::::::::.::: gi|194 ADQSLYTADSENEEDKRRTKKAKMKIEEISRIEGMENEESQKPLKRFFTSVKSELRNRSS 610 620 630 640 650 660 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::.::::::.:.:::. ::::::::::::::::::::: :::::::.::::::::: gi|194 EYSDISDSEDSGPDCAALKNNFTTEESESSGDEKKQEITSNFMEESNVMRSFLQKSQKPS 670 680 690 700 710 720 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::.::::::::::::::::::::::::::: :::::::::::::: ::::::::::. gi|194 RSEIPVKRECPTSTSTEEEAIQGMLSMAGLHYSPCLQRQIQSTDCSGEGNSLQDPSSCHS 730 740 750 760 770 780 220 230 240 250 260 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDT-SRFHPQDLSRSQKCIRKEGS ::: ::::::::::::::::::::: :::.:::.::::: :::. :::::.::::.:::: gi|194 SNHAVRQLYRYDKPVECGYHVKTEDQDLRSSSWVKQFDTTSRFNLQDLSRGQKCIKKEGS 790 800 810 820 830 840 270 280 290 300 310 320 KIAA17 SEISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHP :::::.::::: ::::::: ::::: :::.: ::::::::::.::::::::::::::::: gi|194 SEISQKVQSRNSVDSSGSSPQNGKYTQNSSLISGACQISNGSISPERPVGETSFSVPLHP 850 860 870 880 890 900 330 340 350 360 370 KIAA17 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 910 920 930 940 950 >>gi|47077508|dbj|BAD18641.1| unnamed protein product [H (930 aa) initn: 2262 init1: 2232 opt: 2232 Z-score: 2357.5 bits: 446.2 E(): 1.3e-122 Smith-Waterman score: 2232; 93.699% identity (95.616% similar) in 365 aa overlap (1-365:565-929) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::::: gi|470 VLKRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQPF 540 550 560 570 580 590 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|470 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTRVKSELRSRSS 600 610 620 630 640 650 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS 660 670 680 690 700 710 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG 720 730 740 750 760 770 220 230 240 250 260 270 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDTSRFHPQDLSRSQKCIRKEGSS 780 790 800 810 820 830 280 290 300 310 320 330 KIAA17 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 EISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHPT 840 850 860 870 880 890 340 350 360 370 KIAA17 KRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV ::::::: ... : . :: .. ::. : gi|470 KRPASNPHLSATRQQKVNVQKKEWQQPNNVLGRSLS 900 910 920 930 >>gi|73978852|ref|XP_539885.2| PREDICTED: similar to PHD (1083 aa) initn: 1472 init1: 1472 opt: 2223 Z-score: 2347.1 bits: 444.5 E(): 4.9e-122 Smith-Waterman score: 2223; 88.889% identity (96.296% similar) in 378 aa overlap (1-377:706-1083) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::.:: gi|739 VLRRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERHPF 680 690 700 710 720 730 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS :: ::::::::::::::::::::::.:::::.::::.:::::::: ::::::::::.::: gi|739 ADPSLYTADSENEEDKRRTKKAKMKMEESSGIEGVENEESQKPLNRFFTSVKSELRNRSS 740 750 760 770 780 790 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::.::::::.:::::. :::::::::::::::::::::::.:.::::::::.:::: gi|739 EYSDISDSEDSGPDCTALKNNFTTEESESSGDEKKQEITSNFKEDSTVMRNFLQKGQKPS 800 810 820 830 840 850 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG ::::::::::::::::::::::::::::::::::::::: ::::::::..::: :..::. gi|739 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQRQSTDCSGEKDSLQGPGGCHS 860 870 880 890 900 910 220 230 240 250 260 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDT-SRFHPQDLSRSQKCIRKEGS ::::.::.:: ::::.::::::::: :::.::::::::: :::: :::::.::::.::.: gi|739 SNHEARQVYRCDKPVDCGYHVKTEDQDLRSSSWIKQFDTTSRFHLQDLSRGQKCIKKESS 920 930 940 950 960 970 270 280 290 300 310 320 KIAA17 SEISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHP :::::.::::: ::::::: ::::: :::.: ::.:::.:::.::::::::::::::::: gi|739 SEISQKVQSRNSVDSSGSSPQNGKYTQNSSLISGVCQINNGSVSPERPVGETSFSVPLHP 980 990 1000 1010 1020 1030 330 340 350 360 370 KIAA17 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 1040 1050 1060 1070 1080 >>gi|119891400|ref|XP_599768.3| PREDICTED: similar to ju (881 aa) initn: 1478 init1: 1478 opt: 2208 Z-score: 2332.5 bits: 441.5 E(): 3.2e-121 Smith-Waterman score: 2208; 88.624% identity (96.296% similar) in 378 aa overlap (1-377:504-881) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::.:::::::::::::::::::::: gi|119 VLRRLEMCPWEEDILSSKLNGKFNKHLQPSSTVPEWRVKDNDLRLLLTNGRIIKDERQPF 480 490 500 510 520 530 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS .::::::::::::::::::::::.:.:::::.::::.:::::::: :.::::::::.::: gi|119 TDQSLYTADSENEEDKRRTKKAKVKMEESSGIEGVENEESQKPLNRFLTSVKSELRNRSS 540 550 560 570 580 590 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS :::::.::::::.::.::. ::::::::::::::::.:::::::::::::::::::::: gi|119 EYSDISDSEDSGPDCTVLKNNFTTEESESSGDEKKQEVTSNFKEESNVMRNFLQKSQKPS 600 610 620 630 640 650 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :::::.:::::::::::::::::::::::::::::::::::::::.::: ::::::.::. gi|119 RSEIPVKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCGGERPSLQDPSGCHS 660 670 680 690 700 710 220 230 240 250 260 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFDT-SRFHPQDLSRSQKCIRKEGS :::::::::: :: :: :::::::: :::.::::::::: :::. :::.:.::::.:: : gi|119 SNHEVRQLYRCDKTVESGYHVKTEDQDLRSSSWIKQFDTTSRFNLQDLNRGQKCIKKEVS 720 730 740 750 760 770 270 280 290 300 310 320 KIAA17 SEISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHP ::::..::::: ::::::::::.:: :.:.: :::::.::::.::::::::::::::::: gi|119 SEISHKVQSRNSVDSSGSSLQNAKYTQSSSLISGACQLSNGSISPERPVGETSFSVPLHP 780 790 800 810 820 830 330 340 350 360 370 KIAA17 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 840 850 860 870 880 >>gi|13938093|gb|AAH07161.1| Jhdm1d protein [Mus musculu (885 aa) initn: 1791 init1: 1314 opt: 1999 Z-score: 2111.8 bits: 400.7 E(): 6.3e-109 Smith-Waterman score: 1999; 81.481% identity (92.063% similar) in 378 aa overlap (1-377:510-885) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::: : gi|139 VLKRLEMCPWEEDLLSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQLF 480 490 500 510 520 530 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::.:::::::::::::. :..:.:: :.::: : .: . : :::: .::::.:::::: : gi|139 ADRSLYTADSENEEDKKPTQNANMKTEQSSGREEAESQGSPKPLNRIFTSVRSELRSRPS 540 550 560 570 580 590 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS ::: :.::::::.::::: :.::.:::::::::.::::.:::::...::.:::::::: gi|139 EYSDGSDSEDSGPDCTALKINFATEDSESSGDEKKHEITSHFKEESDIVRNLLQKSQKPS 600 610 620 630 640 650 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :.:::.:::::::::::::::::::::::::::.::::::::::::::.::::::::::: gi|139 RQEIPVKRECPTSTSTEEEAIQGMLSMAGLHYSSCLQRQIQSTDCSGEKNSLQDPSSCHG 660 670 680 690 700 710 220 230 240 250 260 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFD-TSRFHPQDLSRSQKCIRKEGS :: : ::::: .:::: :::.:::: :: :::: :::: ::::. :::::::: :.::.: gi|139 SNPEFRQLYRCNKPVEFGYHAKTEDQDLMTSSWNKQFDRTSRFNAQDLSRSQKHIKKESS 720 730 740 750 760 770 270 280 290 300 310 320 KIAA17 SEISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHP :::.:..:::. :::..::.::::: : .:.: :::::::::::::.::::::.:::: gi|139 SEINQKAQSRHCVDSNSSSIQNGKYTLNPSLVS--CQISNGSLSPERPIGETSFSMPLHP 780 790 800 810 820 830 330 340 350 360 370 KIAA17 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV :::::::::::::::::::::::::::::::::::::::::::::::: gi|139 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 840 850 860 870 880 >>gi|74200097|dbj|BAE22876.1| unnamed protein product [M (889 aa) initn: 1999 init1: 1314 opt: 1999 Z-score: 2111.7 bits: 400.7 E(): 6.4e-109 Smith-Waterman score: 1999; 81.481% identity (92.063% similar) in 378 aa overlap (1-377:514-889) 10 20 30 KIAA17 STVPEWRAKDNDLRLLLTNGRIIKDERQPF :::::::::::::::::::::::::::: : gi|742 VLKRLEMCPWEEDLLSSKLNGKFNKHLQPSSTVPEWRAKDNDLRLLLTNGRIIKDERQLF 490 500 510 520 530 540 40 50 60 70 80 90 KIAA17 ADQSLYTADSENEEDKRRTKKAKMKIEESSGVEGVEHEESQKPLNGFFTSVKSELRSRSS ::.:::::::::::::. :..:.:: :.::: : .: . : :::: .::::.:::::: : gi|742 ADRSLYTADSENEEDKKPTQNANMKTEQSSGREEAESQGSPKPLNRIFTSVRSELRSRPS 550 560 570 580 590 600 100 110 120 130 140 150 KIAA17 GYSDISESEDSGPECTALKSIFTTEESESSGDEKKQEITSNFKEESNVMRNFLQKSQKPS ::: :.::::::.::::: :.::.:::::::::.::::.:::::...::.:::::::: gi|742 EYSDGSDSEDSGPDCTALKINFATEDSESSGDEKKHEITSHFKEESDIVRNLLQKSQKPS 610 620 630 640 650 660 160 170 180 190 200 210 KIAA17 RSEIPIKRECPTSTSTEEEAIQGMLSMAGLHYSTCLQRQIQSTDCSGERNSLQDPSSCHG :.:::.:::::::::::::::::::::::::::.::::::::::::::.::::::::::: gi|742 RQEIPVKRECPTSTSTEEEAIQGMLSMAGLHYSSCLQRQIQSTDCSGEKNSLQDPSSCHG 670 680 690 700 710 720 220 230 240 250 260 KIAA17 SNHEVRQLYRYDKPVECGYHVKTEDPDLRTSSWIKQFD-TSRFHPQDLSRSQKCIRKEGS :: : ::::: .:::: :::.:::: :: :::: :::: ::::. :::::::: :.::.: gi|742 SNPEFRQLYRCNKPVEFGYHAKTEDQDLMTSSWNKQFDRTSRFNAQDLSRSQKHIKKESS 730 740 750 760 770 780 270 280 290 300 310 320 KIAA17 SEISQRVQSRNYVDSSGSSLQNGKYMQNSNLTSGACQISNGSLSPERPVGETSFSVPLHP :::.:..:::. :::..::.::::: : .:.: :::::::::::::.::::::.:::: gi|742 SEINQKAQSRHCVDSNSSSIQNGKYTLNPSLVS--CQISNGSLSPERPIGETSFSMPLHP 790 800 810 820 830 840 330 340 350 360 370 KIAA17 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV :::::::::::::::::::::::::::::::::::::::::::::::: gi|742 TKRPASNPPPISNQATKGKRPKKGMATAKQRLGKILKLNRNGHARFFV 850 860 870 880 377 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 13:43:55 2009 done: Thu Mar 5 13:48:59 2009 Total Scan time: 1479.020 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]