hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10245591/chunk_1/iprscan-20080502-10245591.nocrc
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Query sequence: KIAA1706
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00278                                                  44.1    1.8e-08   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00278    1/3      52    71 ..     1    20 []    20.4     0.26
SM00278    2/3      82   101 ..     1    20 []     6.2  4.5e+02
SM00278    3/3     149   168 ..     1    20 []    17.6      1.8

Alignments of top-scoring domains:
SM00278: domain 1 of 3, from 52 to 71: score 20.4, E = 0.26
                   *->eeLlkvpGiGpktAekilea<-*
                      eeL+ +pG+ +++A++i+e+   
    KIAA1706    52    EELMTLPGVTRAVARSIVEY    71   

SM00278: domain 2 of 3, from 82 to 101: score 6.2, E = 4.5e+02
                   *->eeLlkvpGiGpktAekilea<-*
                      e+L  v+G+G  + e+++ +   
    KIAA1706    82    EDLALVSGVGATKLEQVKFE    101  

SM00278: domain 3 of 3, from 149 to 168: score 17.6, E = 1.8
                   *->eeLlkvpGiGpktAekilea<-*
                       +L++v G+++k+A +i+++   
    KIAA1706   149    AQLMSVRGLSEKMALSIVDF    168  

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