hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10195015/chunk_1/iprscan-20080502-10195015.nocrc
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Query sequence: KIAA1703
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 265.2      5e-75  12

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/12    331   354 ..     1    23 []    14.7        7
SM00355      2/12    361   385 ..     1    23 []    20.7     0.21
SM00355      3/12    403   426 ..     1    23 []    22.4    0.062
SM00355      4/12    454   478 ..     1    23 []    10.7       19
SM00355      5/12    484   506 ..     1    23 []    21.0     0.16
SM00355      6/12    512   535 ..     1    23 []    24.9    0.011
SM00355      7/12    545   567 ..     1    23 []    30.1   0.0003
SM00355      8/12    573   597 ..     1    23 []    28.1   0.0012
SM00355      9/12    603   625 ..     1    23 []    21.6     0.11
SM00355     10/12    631   653 ..     1    23 []    27.3   0.0022
SM00355     11/12    659   684 ..     1    23 []    19.3     0.55
SM00355     12/12    690   713 ..     1    23 []    24.5    0.015

Alignments of top-scoring domains:
SM00355: domain 1 of 12, from 331 to 354: score 14.7, E = 7
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C+  Cg+     + L+ H+  +H   
    KIAA1703   331    IRCDD-CGFLADGLsGLNVHIAmKH    354  

SM00355: domain 2 of 12, from 361 to 385: score 20.7, E = 0.21
                   *->ykCpigCgksfssk.aLkrHmr..vH<-*
                      ++C + Cgksf ++++L +H+ +  H   
    KIAA1703   361    FHCLL-CGKSFYTEsNLHQHLAsaGH    385  

SM00355: domain 3 of 12, from 403 to 426: score 22.4, E = 0.062
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      +kC + C + f s+++L  H++++H   
    KIAA1703   403    FKCVK-CTEPFDSEqNLFLHIKgQH    426  

SM00355: domain 4 of 12, from 454 to 478: score 10.7, E = 19
                   *->ykCpigCg..ksfssk.aLkrHmrvH<-*
                       +C++ Cg+  + s+  a+  H+r+H   
    KIAA1703   454    NVCKY-CGkmCRSSNSmAFLAHIRTH    478  

SM00355: domain 5 of 12, from 484 to 506: score 21.0, E = 0.16
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC+i C++ + + ++ ++H+++H   
    KIAA1703   484    FKCKI-CHFATAQLgDARNHVKRH    506  

SM00355: domain 6 of 12, from 512 to 535: score 24.9, E = 0.011
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ykC++ Cg  f  k++L+ H+ ++H   
    KIAA1703   512    YKCHV-CGVAFVMKkHLNTHLLgKH    535  

SM00355: domain 7 of 12, from 545 to 567: score 30.1, E = 0.0003
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C++sf+ k aL++Hm+ H   
    KIAA1703   545    FTCHL-CDRSFTEKwALNNHMKLH    567  

SM00355: domain 8 of 12, from 573 to 597: score 28.1, E = 0.0012
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                      +kC+++ C++sf +++a+k H+r+H   
    KIAA1703   573    FKCTWpTCHYSFLTAsAMKDHYRTH    597  

SM00355: domain 9 of 12, from 603 to 625: score 21.6, E = 0.11
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cg+   +++aL++H r+H   
    KIAA1703   603    FLCDL-CGFAGGTRhALTKHRRQH    625  

SM00355: domain 10 of 12, from 631 to 653: score 27.3, E = 0.0022
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ C++  +++++L+rH rvH   
    KIAA1703   631    FKCDE-CNFASTTQsHLTRHKRVH    653  

SM00355: domain 11 of 12, from 659 to 684: score 19.3, E = 0.55
                   *->ykCpigCgksfssk.aLkrHmr...vH<-*
                      y+Cp+ C+++ + +++ ++H+ ++++H   
    KIAA1703   659    YRCPW-CDYRSNCAeNIRKHILhtgKH    684  

SM00355: domain 12 of 12, from 690 to 713: score 24.5, E = 0.015
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y Cp+ C++ ++ + ++++H++++H   
    KIAA1703   690    YNCPK-CDYGTNVPvEFRNHLKeQH    713  

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