# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj15966.fasta.nr -Q ../query/KIAA1702.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA1702, 530 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7826180 sequences
Expectation_n fit: rho(ln(x))= 5.6412+/-0.000187; mu= 9.5068+/- 0.010
mean_var=85.5586+/-16.763, 0's: 28 Z-trim: 31 B-trim: 3605 in 2/66
Lambda= 0.138657
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|119624878|gb|EAX04473.1| hCG1737847 [Homo sapie ( 502) 3411 692.3 8.4e-197
gi|55665234|emb|CAH71222.1| zinc finger protein 45 ( 559) 3377 685.5 1e-194
gi|109071589|ref|XP_001110436.1| PREDICTED: hypoth ( 496) 3336 677.3 2.7e-192
gi|18044543|gb|AAH19546.1| Zfp451 protein [Mus mus ( 559) 3040 618.1 2e-174
gi|74198331|dbj|BAB29981.3| unnamed protein produc ( 513) 2675 545.0 1.8e-152
gi|194380134|dbj|BAG63834.1| unnamed protein produ ( 459) 2660 542.0 1.3e-151
gi|109098344|ref|XP_001082600.1| PREDICTED: thymop ( 695) 202 50.4 0.0019
gi|885683|gb|AAB60433.1| thymopoietin alpha [Homo ( 694) 193 48.6 0.0065
>>gi|119624878|gb|EAX04473.1| hCG1737847 [Homo sapiens] (502 aa)
initn: 3411 init1: 3411 opt: 3411 Z-score: 3689.4 bits: 692.3 E(): 8.4e-197
Smith-Waterman score: 3411; 100.000% identity (100.000% similar) in 502 aa overlap (29-530:1-502)
10 20 30 40 50 60
KIAA17 VLLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPI
::::::::::::::::::::::::::::::::
gi|119 MWITQRMPESKVPSSENHRPEMCSSCNVPLPI
10 20 30
70 80 90 100 110 120
KIAA17 GDSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GDSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSS
40 50 60 70 80 90
130 140 150 160 170 180
KIAA17 PLLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PLLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHH
100 110 120 130 140 150
190 200 210 220 230 240
KIAA17 SRPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SRPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRG
160 170 180 190 200 210
250 260 270 280 290 300
KIAA17 VIKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VIKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVY
220 230 240 250 260 270
310 320 330 340 350 360
KIAA17 PVAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PVAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAA
280 290 300 310 320 330
370 380 390 400 410 420
KIAA17 SYMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SYMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVM
340 350 360 370 380 390
430 440 450 460 470 480
KIAA17 AMAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 AMAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKY
400 410 420 430 440 450
490 500 510 520 530
KIAA17 YNQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 YNQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
460 470 480 490 500
>>gi|55665234|emb|CAH71222.1| zinc finger protein 451 [H (559 aa)
initn: 3377 init1: 3377 opt: 3377 Z-score: 3652.0 bits: 685.5 E(): 1e-194
Smith-Waterman score: 3377; 99.800% identity (100.000% similar) in 499 aa overlap (32-530:61-559)
10 20 30 40 50 60
KIAA17 LLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPIG
:.::::::::::::::::::::::::::::
gi|556 IQFVSEGPLRPVLEYIDLVSSDDEEPSTSYTDRMPESKVPSSENHRPEMCSSCNVPLPIG
40 50 60 70 80 90
70 80 90 100 110 120
KIAA17 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
100 110 120 130 140 150
130 140 150 160 170 180
KIAA17 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
160 170 180 190 200 210
190 200 210 220 230 240
KIAA17 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
220 230 240 250 260 270
250 260 270 280 290 300
KIAA17 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
280 290 300 310 320 330
310 320 330 340 350 360
KIAA17 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
340 350 360 370 380 390
370 380 390 400 410 420
KIAA17 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
400 410 420 430 440 450
430 440 450 460 470 480
KIAA17 MAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 MAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKYY
460 470 480 490 500 510
490 500 510 520 530
KIAA17 NQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|556 NQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
520 530 540 550
>>gi|109071589|ref|XP_001110436.1| PREDICTED: hypothetic (496 aa)
initn: 3336 init1: 3336 opt: 3336 Z-score: 3608.4 bits: 677.3 E(): 2.7e-192
Smith-Waterman score: 3336; 99.194% identity (99.798% similar) in 496 aa overlap (35-530:1-496)
10 20 30 40 50 60
KIAA17 GHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPIGDSS
::::::::::::::::::::.:::::::::
gi|109 MPESKVPSSENHRPEMCSSCSVPLPIGDSS
10 20 30
70 80 90 100 110 120
KIAA17 SFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSPLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSPLLV
40 50 60 70 80 90
130 140 150 160 170 180
KIAA17 PQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHSRPS
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
gi|109 PQESLASSEVKENLCIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHSRPS
100 110 120 130 140 150
190 200 210 220 230 240
KIAA17 ENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGVIKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGVIKR
160 170 180 190 200 210
250 260 270 280 290 300
KIAA17 VTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYPVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYPVAK
220 230 240 250 260 270
310 320 330 340 350 360
KIAA17 DTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAASYMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAASYMA
280 290 300 310 320 330
370 380 390 400 410 420
KIAA17 YMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMAMAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 YMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMAMAI
340 350 360 370 380 390
430 440 450 460 470 480
KIAA17 DYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKYYNQH
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::::
gi|109 DYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEENSIKENDYKDHKYYNQH
400 410 420 430 440 450
490 500 510 520 530
KIAA17 RYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
460 470 480 490
>>gi|18044543|gb|AAH19546.1| Zfp451 protein [Mus musculu (559 aa)
initn: 2264 init1: 2228 opt: 3040 Z-score: 3287.7 bits: 618.1 E(): 2e-174
Smith-Waterman score: 3040; 89.400% identity (96.000% similar) in 500 aa overlap (32-530:61-559)
10 20 30 40 50 60
KIAA17 LLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPIG
..:::::::::::::::::::::.::::::
gi|180 IQFVSEGPLRPVLEYIDLVSSDDEEPSTSHSDRMPESKVPSSENHRPEMCSSCSVPLPIG
40 50 60 70 80 90
70 80 90 100 110 120
KIAA17 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
:::: ::::..::.::::: :::::::::::::.::::...:: :::: ..: :::::.
gi|180 DSSSSSGSCANSPQRIVSQPSSVENPLENQKNDHNNSDVSVSEKETLKPQSN-QTLPSAS
100 110 120 130 140
130 140 150 160 170 180
KIAA17 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
:: ::::: :::::.: ::::: :.:::::::::::::::::::::::::::::::
gi|180 LLGSQESLAFSEVKEDLPGTMSSASQSGQDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
150 160 170 180 190 200
190 200 210 220 230 240
KIAA17 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
::::.::::::::.:::..:::::::.: ::::::::::: :: ::::::::::::::::
gi|180 RPSESSSVPWDISSSKEDSLSTVEEESDCKSPSADDKGQPPDPMQSSFTGLLKRMEQRGV
210 220 230 240 250 260
250 260 270 280 290 300
KIAA17 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
:::::.:::::.:::::: .::::::::::::::::::::::::::::::::::::::::
gi|180 IKRVTFQSEAETCEGKPDWMTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
270 280 290 300 310 320
310 320 330 340 350 360
KIAA17 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
::::::::::::::::::...:::::::::.:::::::::::::::::::::::::::::
gi|180 VAKDTSPFQPNPPAEGPIIDVLEHSKRGNTASPLDSTSKEMEVMGCRFYHAASIAARAAS
330 340 350 360 370 380
370 380 390 400 410 420
KIAA17 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|180 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
390 400 410 420 430 440
430 440 450 460 470 480
KIAA17 MAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDH-KY
::.::::::::::::::::::::: ::::::::::::::.:.:::::.::::.:::: ::
gi|180 MAVDYRRQAWLRLTSLTKKTQEKILHLPFDGTSLFGQDVNAIVAEDNSIKENEYKDHNKY
450 460 470 480 490 500
490 500 510 520 530
KIAA17 YNQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
:.::::::::::::::::::::::::::::::::::::::::::::::::
gi|180 YTQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
510 520 530 540 550
>>gi|74198331|dbj|BAB29981.3| unnamed protein product [M (513 aa)
initn: 2698 init1: 2223 opt: 2675 Z-score: 2893.6 bits: 545.0 E(): 1.8e-152
Smith-Waterman score: 2675; 88.300% identity (95.585% similar) in 453 aa overlap (32-483:61-512)
10 20 30 40 50 60
KIAA17 LLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPIG
..:::::::::::::::::::::.::::::
gi|741 IQFVSEGPLRPVLEYIDLVSSDDEEPSTSHSDRMPESKVPSSENHRPEMCSSCSVPLPIG
40 50 60 70 80 90
70 80 90 100 110 120
KIAA17 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
:::: ::::..::.::::: :::::::::::::.::::...:: :::: ..: :::::.
gi|741 DSSSSSGSCANSPQRIVSQPSSVENPLENQKNDHNNSDVSVSEKETLKPQSN-QTLPSAS
100 110 120 130 140
130 140 150 160 170 180
KIAA17 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
:: ::::: :::::.: ::::: :.:::::::::::::::::::::::::::::::
gi|741 LLGSQESLAFSEVKEDLPGTMSSASQSGQDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
150 160 170 180 190 200
190 200 210 220 230 240
KIAA17 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
::::.::::::::.:::..:::::::.: ::::::::::: :: ::::::::::::::::
gi|741 RPSESSSVPWDISSSKEDSLSTVEEESDCKSPSADDKGQPPDPMQSSFTGLLKRMEQRGV
210 220 230 240 250 260
250 260 270 280 290 300
KIAA17 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
:::::.:::::.:::::: .::::::::::::::::::::::::::::::::::::::::
gi|741 IKRVTFQSEAETCEGKPDWMTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
270 280 290 300 310 320
310 320 330 340 350 360
KIAA17 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
::::::::::::::::::...:::::::::.:::::::::::::::::::::::::::::
gi|741 VAKDTSPFQPNPPAEGPIIDVLEHSKRGNTASPLDSTSKEMEVMGCRFYHAASIAARAAS
330 340 350 360 370 380
370 380 390 400 410 420
KIAA17 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
390 400 410 420 430 440
430 440 450 460 470 480
KIAA17 MAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDH-KY
::.::::::::::::::::::::: ::::::::::::::.:.:::::.::::.:::: ::
gi|741 MAVDYRRQAWLRLTSLTKKTQEKILHLPFDGTSLFGQDVNAIVAEDNSIKENEYKDHNKY
450 460 470 480 490 500
490 500 510 520 530
KIAA17 YNQHRYFYSHDQKAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
:.:
gi|741 YTQL
510
>>gi|194380134|dbj|BAG63834.1| unnamed protein product [ (459 aa)
initn: 2660 init1: 2660 opt: 2660 Z-score: 2878.1 bits: 542.0 E(): 1.3e-151
Smith-Waterman score: 2660; 99.749% identity (100.000% similar) in 399 aa overlap (32-430:61-459)
10 20 30 40 50 60
KIAA17 LLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRPEMCSSCNVPLPIG
:.::::::::::::::::::::::::::::
gi|194 IQFVSEGPLRPVLEYIDLVSSDDEEPSTSYTDRMPESKVPSSENHRPEMCSSCNVPLPIG
40 50 60 70 80 90
70 80 90 100 110 120
KIAA17 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 DSSSFSGSCSSSPERIVSQTSSVENPLENQKNDQNNSDTKISETETLKSSQNFQTLPSSP
100 110 120 130 140 150
130 140 150 160 170 180
KIAA17 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 LLVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIRDLQSRSCFRFHHS
160 170 180 190 200 210
190 200 210 220 230 240
KIAA17 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 RPSENSSVPWDISTSKEENLSTVEEETDYKSPSADDKGQPSDPSQSSFTGLLKRMEQRGV
220 230 240 250 260 270
250 260 270 280 290 300
KIAA17 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYP
280 290 300 310 320 330
310 320 330 340 350 360
KIAA17 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 VAKDTSPFQPNPPAEGPIVEALEHSKRGNTTSPLDSTSKEMEVMGCRFYHAASIAARAAS
340 350 360 370 380 390
370 380 390 400 410 420
KIAA17 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 YMAYMTQYQRKLWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMA
400 410 420 430 440 450
430 440 450 460 470 480
KIAA17 MAIDYRRQAWLRLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKYY
:::::::::
gi|194 MAIDYRRQA
>>gi|109098344|ref|XP_001082600.1| PREDICTED: thymopoiet (695 aa)
initn: 230 init1: 145 opt: 202 Z-score: 218.2 bits: 50.4 E(): 0.0019
Smith-Waterman score: 207; 22.717% identity (53.396% similar) in 427 aa overlap (67-469:291-693)
40 50 60 70 80 90
KIAA17 ESKVPSSENHRPEMCSSCNVPLPIGDSSSFSGSCSSSPERIVSQTSSVENP-LENQKNDQ
:.: ::.::. . .:.. .: : .. .
gi|109 LPGRGQLQKLASERNLFISCKSSHNRCLEKSSSSSSQPEHSAMLVSAAASPSLIKETTTA
270 280 290 300 310 320
100 110 120 130 140 150
KIAA17 NNSDTKISETETLKSSQNFQTL-PSSPLLVPQESLASS----EVKENLRIDSSSASQHGR
.: : :. . ....: : : . : :.:. : .:. .. : .: :
gi|109 CYKD--IVENICGREKSGIQPLCPERSHISDQSPLSSKRKALEESESSKLISPPLAQAIR
330 340 350 360 370
160 170 180 190 200 210
KIAA17 DAILYLQTQVAEMSRVIRDLQSRSCFRFHHSRPSENSSVPWDISTSKEENLSTVEEETDY
: . : .: . : : . : ::. : :. . ... .. .::..
gi|109 DYVNSLLVQGGTGS-----LPGTS-----------NSTPPLDVENIQKRIDQSKFQETEF
380 390 400 410 420
220 230 240 250
KIAA17 KSP----------SADDKGQPSDPSQSSFTG--LLKRMEQRGVIKR--VTLQSEAESCEG
:: :.... . : . ... : :: . :... .:: :. : ..
gi|109 LSPPRKVPRLSEKSVEERDSGSVVAFQNIPGSELLPSSFAKTVVSHSLTTLGLEV-SKQS
430 440 450 460 470 480
260 270 280 290 300 310
KIAA17 KPDCVTSKKRLVPPLHPLLRIATTEVFKDPADCHPSSFMGHRVYPVA-KDTSPFQPNPPA
. : . ... : :.: . . : ... :: .. : :::. :... . : .
gi|109 QHDKIDASE-LSFPFHESILKVIEEEWQQVDRQLPS--LACR-YPVSSKEATRLLSVPKV
490 500 510 520 530
320 330 340 350 360 370
KIAA17 EGPIVEALEHSK--RGNTTSPLDSTSKEMEVMGCRFYHAASIAARAASYMAYMTQ-YQRK
. :. . .. : .. .: .:.... :: :.::. : . :.. :.... .:
gi|109 DDEILGFISEATPPAGIQATSTESCDKQLDLALCRAYEAAASALQIATHTAFVAKAMQAD
540 550 560 570 580 590
380 390 400 410 420 430
KIAA17 LWEDMEDLVHDPEFDRGKARCIISDGMDAGLWQLCTTRDIMDSVVRVMAMAIDYRRQAWL
. . . : :: . .: :.: .::. . .. : . ....:. . :: ::
gi|109 ISQAAQILSSDPSRTH-QALGILSKTYDAASYICEAAFDEVKMAAHTMGNSTVGRRYLWL
600 610 620 630 640 650
440 450 460 470 480 490
KIAA17 RLTSLTKKTQEKISHLPFDGTSLFGQDVKAVVAEDNNIKENDYKDHKYYNQHRYFYSHDQ
. ... .. :.. :: : .::: .: :. . .:
gi|109 KDCKINLASKSKLASTPFKGGTLFGGEVCKVIKKRGNKH
660 670 680 690
500 510 520 530
KIAA17 KAHYHNRGYSKGDWYKPRNHPYRYRKKGDSPERHGYKN
>>gi|885683|gb|AAB60433.1| thymopoietin alpha [Homo sapi (694 aa)
initn: 219 init1: 152 opt: 193 Z-score: 208.5 bits: 48.6 E(): 0.0065
Smith-Waterman score: 198; 20.896% identity (52.665% similar) in 469 aa overlap (32-469:236-692)
10 20 30 40 50
KIAA17 LLTGHESLHLKVNILKAYFFSSLVFLFMWITQRMPESKVPSSENHRP-EMCSSCNVP---
:. . .:: .:.. : : . :.:
gi|885 FSELGTTPSGGGFFQGISFPEISTRPPLGSTELQAAKKVHTSKGDLPREPLVATNLPGRG
210 220 230 240 250 260
60 70 80 90 100 110
KIAA17 --LPIGDSSSFSGSCSSSPERIVSQTSSVENPLENQKN--DQNNSDTKISETET--LKS-
... .. ::.:: .: . ..:: . :.. . : . :.:: : :.
gi|885 QLQKLASERNLFISCKSSHDRCLEKSSSSSSQPEHSAMLVSTAASPSLIKETTTGYYKDI
270 280 290 300 310 320
120 130 140 150 160
KIAA17 SQNFQTLPSSPL--LVPQESLASSEVKENLRIDSSSASQHGRDAILYLQTQVAEMSRVIR
.:. .: . : :..: :.. . . . :. . : ....::
gi|885 VENICGREKSGIQPLCPERSHISDQSPLSSKRKALEESESS-------QLISPPLAQAIR
330 340 350 360 370
170 180 190 200 210
KIAA17 DLQSRSCFRFH-HSRP-SENSSVPWDISTSKEENLSTVEEETDYKSP----------SAD
: . . : : . :: : :. . ... .. .::.. :: :..
gi|885 DYVNSLLVQGGVGSLPGTSNSMPPLDVENIQKRIDQSKFQETEFLSPPRKVPRLSEKSVE
380 390 400 410 420 430
220 230 240 250 260 270
KIAA17 DKGQPSDPSQSSFTG--LLKRMEQRGVIKRVTLQSEAESCEGKPDCVTSKKRLVPPLHPL
.. . : . ... : :.. . . : . .: . . ... : . ... : :.:
gi|885 ERDSGSFVAFQNIPGSELMSSFAKTVVSHSLTTLGLEVAKQSQHDKIDASE-LSFPFHES
440 450 460 470 480 490
280 290 300 310 320 330
KIAA17 LRIATTEVFKDPADCHPSSFMGHRVYPVA-KDTSPFQPNPPAEGPIVEALEHSKR--GNT
. . : ... :: .. . :::. .... . : .. :. . .. :
gi|885 ILKVIEEEWQQVDRQLPS--LACK-YPVSSREATQILSVPKVDDEILGFISEATPLGGIQ
500 510 520 530 540 550
340 350 360 370 380 390
KIAA17 TSPLDSTSKEMEVMGCRFYHAASIAARAASYMAYMTQ-YQRKLWEDMEDLVHDPEFDRGK
.. .: ...... :: :.::. : . :.. :.... .: . : . : :: . .
gi|885 AASTESCNQQLDLALCRAYEAAASALQIATHTAFVAKAMQADISEAAQILSSDPSRTH-Q
560 570 580 590 600 610
400 410 420 430 440 450
KIAA17 ARCIISDGMDAGLWQLCTTRDIMDSVVRVMAMAIDYRRQAWLRLTSLTKKTQEKISHLPF
: :.: .::. . .. : . ....:. : :: ::. ... ...:.. ::
gi|885 ALGILSKTYDAASYICEAAFDEVKMAAHTMGNATVGRRYLWLKDCKINLASKNKLASTPF
620 630 640 650 660 670
460 470 480 490 500 510
KIAA17 DGTSLFGQDVKAVVAEDNNIKENDYKDHKYYNQHRYFYSHDQKAHYHNRGYSKGDWYKPR
: .::: .: :. . .:
gi|885 KGGTLFGGEVCKVIKKRGNKH
680 690
530 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Thu Mar 5 12:37:28 2009 done: Thu Mar 5 12:41:41 2009
Total Scan time: 1548.400 Total Display time: 0.160
Function used was FASTA [version 34.26.5 April 26, 2007]