hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10094400/chunk_1/iprscan-20080502-10094400.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1697 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF03028.6.fs Dynein heavy chain 929.5 3.3e-280 2 PF03028.6.ls Dynein heavy chain 926.4 1.1e-275 1 PF07728.4.ls ATPase family associated with various ce 11.7 0.00021 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF07728.4.ls 1/1 115 262 .. 1 184 [] 11.7 0.00021 PF03028.6.ls 1/1 1425 2179 .. 1 783 [] 926.4 1.1e-275 PF03028.6.fs 2/2 1512 2179 .. 78 783 .] 928.5 6.9e-280 Alignments of top-scoring domains: PF07728.4.ls: domain 1 of 1, from 115 to 262: score 11.7, E = 0.00021 *->gvlLvGpPGtGKselaerlaealsgqggrplfyvqltrdtteedLlg +vl+ G +G+GKs +a+ l+ ++ g+ ++y ++++t+++ KIAA1697 115 SVLFTGITGVGKSVIAKGLLNKIQESAGYVPVYLNFSAQTSSARTQE 161 rrdiapllhGngttswvdgpLvrAaryaretegslpeghivvlDEinras +++ + ++ + +L + + ++++D++n+ + KIAA1697 162 IIE-------SKLERKRKNILGAPGN----------KRIVIFVDDLNMPR 194 pevlnaLlslLderrlllpdggelvkvapydklaergreeldlwklgrli + ++ ++++ r + + gg++ + +++ k ++ KIAA1697 195 LDRYGSQ-PPIELLRQYQDFGGFYDRNKLFWKEIQD-------------- 229 hdfrliataNpldgprglnelsaALrrRFlfvtvdpp<-* + +i ++ p++ +g+n++ + ++r F + ++ p KIAA1697 230 --VTIISACAPPG--GGRNPVTPRFIRHFSMLCLPMP 262 PF03028.6.ls: domain 1 of 1, from 1425 to 2179: score 926.4, E = 1.1e-275 *->lentypnpkvdwlsdqqWdsiarLselee...FrgLdddleknapdk ++ p+p wl++ W +++ L+e + + F+gL++++ ++ + KIAA1697 1425 EKERPPKPEAPWLPTATWFACCDLEE--SfpvFHGLTQNILSHPISI 1469 rWkkwydseqPgEeeklPkeWkdeq.kl..................sids r + +P ++W+ +k ++++++ +++++ +++++ s KIAA1697 1470 RLGSFETYINP-------QKWE-GYsKMkhedkhmrqekeaahqdpW--S 1509 lkksaFqKLlllRalRPDRltyalrnFveekLpGekfvepdppldlskiy +s F+KL+l+++ ++++++ al++Fv+e+L G++f+e+ pp+dl y KIAA1697 1510 AGLSSFHKLILIKCCKEEKVVFALTDFVIENL-GKQFIET-PPVDLPTLY 1557 ekeSspstPilFiLSPGaDPskdvekLAkkmGFtfdnGkklhSiSLGQGQ + + s++tP++FiLS+G+DP++ + +A++ G++ ++ +SiSLGQGQ KIAA1697 1558 Q-DMSCNTPLVFILSTGSDPMGAFQRFARESGYS----ERVQSISLGQGQ 1602 gpniAekaIetAaksGhWVlLQNiHLaasWLptLEKkLesltppegtHpd gp iAek+ + A ksG+WV+LQN+HLa sW+ E + +t p+++ d KIAA1697 1603 GP-IAEKMVKDAMKSGNWVFLQNCHLAVSWMLAMEELIKTFTDPDSAIKD 1651 .FRLFLTaEpaprPeehIfPiglLqnSiKiTNEPPtGlKANLlraysnDP +FRLFL+++p+ + fP+++LqnS+K+TNEPP+Gl+AN++ra++ KIAA1697 1652 tFRLFLSSMPSNT-----FPVTVLQNSVKVTNEPPKGLRANIRRAFTE-- 1694 IfdqeflemckkpaefkrllFlLCfFHAVVqERRkFGPlGWNksYEFNes ++ f+e ++++++F++CfFHA++qER+kFGPlGWN+ YEFN+s KIAA1697 1695 -MTPSFFEENILGKKWRQIIFGICFFHAIIQERKKFGPLGWNICYEFNDS 1743 DLriSvdvldnyLeanakGRqNidpdkvPWeaLRYlfGeimYGGrItDdw D++++++ l y + k+PW+aL Y++Gei+YGGr+tD w KIAA1697 1744 DRECALLNLKLYCKEG----------KIPWDALIYITGEITYGGRVTDSW 1783 DrRLLrtyLeefftpelfdgnadyeLapkidgdlgfavPpntdyeeYiey D+R+Lrt+L +ff pe ++ dy++ + ++++f +P + +e+ y KIAA1697 1784 DQRCLRTILKRFFSPETLEE--DYKYSE---SGIYF-APMADSLQEFKDY 1827 IeesLPsessPelfGLhpNAEIgfltqeteklirtllelQpreaggeldg Ie+ LP +++Pe+fG+h+NA+ +f+ +et +li+t+le+Qpr++ g KIAA1697 1828 IEN-LPLIDDPEIFGMHENANLVFQYKETSTLINTILEVQPRSST----G 1872 gsgekvsrkkdssEEvvkqvlrdileklpkklCqklFdkeelmlkrt.ee g+g +s+ +E+v+++ + +++++p kl + e+ + ++ KIAA1697 1873 GEG--KSN-----DEIVQELVASVQTRVPEKL--EMEGASESLFVKDlQG 1913 ikdPlfvVlvQEiermNkLlkeirrSLkeLdlglkGeltmsndlEeliks ++l++Vl QE++r+N Llk i++SL+ L +++ G ++ms+++E++++s KIAA1697 1914 RLNSLTTVLGQEVDRFNNLLKLIHTSLETLNKAIAGFVVMSEEMEKVYNS 1963 LlngrVPaWDmWakksyPslkpLgsWvtDLlkRirQLqeWtedsGGAklg ln++VPa W + +yPslkpLgsWv DL R+ + + W + g KIAA1697 1964 FLNNQVPA--LWSNTAYPSLKPLGSWVKDLILRTSFVDLWLKR------G 2005 lPkvvWLsGFFnPQsFLTAimQsvARknkwPLDkLcLdteVtkkekeeqd +Pk++W+sGFF+PQ FLT++ Q+ ARk+ +P+D+L + + V +++ KIAA1697 2006 QPKSYWISGFFFPQGFLTGTLQNHARKYNLPIDELSFKYSVI----PTYR 2051 skep......................PedGvyVhGLfLEGArWDsktgll + + + ++ + +++ + + + ++PedGv VhG+f++ rWD k++++ KIAA1697 2052 DQAAvieaaktvqfgqelpmdmelpsPEDGVLVHGMFMDASRWDDKEMVI 2101 aeskpKeLfspmPViwlkavpasdkqetkdvyecPVYktkaRggvLSTTG ++++p + +++PV+++ + + ++ y cP+Ykt aR g+LSTTG KIAA1697 2102 EDALPGQMNPVLPVVHFEPQQN--YKPSPTLYHCPLYKTGARAGTLSTTG 2149 HStnyvftfnLktkedtpaskWilaGVALllq<-* HStn+v+t++L++k +++ Wi +G ALl+q KIAA1697 2150 HSTNFVVTVLLPSKR--SKDYWIAKGSALLCQ 2179 PF03028.6.fs: domain 2 of 2, from 1512 to 2179: score 928.5, E = 6.9e-280 *->ksaFqKLlllRalRPDRltyalrnFveekLpGekfvepdppldlski +s F+KL+l+++ ++++++ al++Fv+e+L G++f+e+ pp+dl KIAA1697 1512 LSSFHKLILIKCCKEEKVVFALTDFVIENL-GKQFIET-PPVDLPTL 1556 yekeSspstPilFiLSPGaDPskdvekLAkkmGFtfdnGkklhSiSLGQG y+ + s++tP++FiLS+G+DP++ + +A++ G++ ++ +SiSLGQG KIAA1697 1557 YQ-DMSCNTPLVFILSTGSDPMGAFQRFARESGYS----ERVQSISLGQG 1601 QgpniAekaIetAaksGhWVlLQNiHLaasWLptLEKkLesltppegtHp Qgp iAek+ + A ksG+WV+LQN+HLa sW+ E + +t p+++ KIAA1697 1602 QGP-IAEKMVKDAMKSGNWVFLQNCHLAVSWMLAMEELIKTFTDPDSAIK 1650 d.FRLFLTaEpaprPeehIfPiglLqnSiKiTNEPPtGlKANLlraysnD d+FRLFL+++p+ + fP+++LqnS+K+TNEPP+Gl+AN++ra++ KIAA1697 1651 DtFRLFLSSMPSNT-----FPVTVLQNSVKVTNEPPKGLRANIRRAFTE- 1694 PIfdqeflemckkpaefkrllFlLCfFHAVVqERRkFGPlGWNksYEFNe ++ f+e ++++++F++CfFHA++qER+kFGPlGWN+ YEFN+ KIAA1697 1695 --MTPSFFEENILGKKWRQIIFGICFFHAIIQERKKFGPLGWNICYEFND 1742 sDLriSvdvldnyLeanakGRqNidpdkvPWeaLRYlfGeimYGGrItDd sD++++++ l y + k+PW+aL Y++Gei+YGGr+tD KIAA1697 1743 SDRECALLNLKLYCKEG----------KIPWDALIYITGEITYGGRVTDS 1782 wDrRLLrtyLeefftpelfdgnadyeLapkidgdlgfavPpntdyeeYie wD+R+Lrt+L +ff pe ++ dy++ + ++++f +P + +e+ KIAA1697 1783 WDQRCLRTILKRFFSPETLEE--DYKYSE---SGIYF-APMADSLQEFKD 1826 yIeesLPsessPelfGLhpNAEIgfltqeteklirtllelQpreaggeld yIe+ LP +++Pe+fG+h+NA+ +f+ +et +li+t+le+Qpr++ KIAA1697 1827 YIEN-LPLIDDPEIFGMHENANLVFQYKETSTLINTILEVQPRSST---- 1871 ggsgekvsrkkdssEEvvkqvlrdileklpkklCqklFdkeelmlkrt.e gg+g +s+ +E+v+++ + +++++p kl + e+ + + KIAA1697 1872 GGEG--KSN-----DEIVQELVASVQTRVPEKL--EMEGASESLFVKDlQ 1912 eikdPlfvVlvQEiermNkLlkeirrSLkeLdlglkGeltmsndlEelik + ++l++Vl QE++r+N Llk i++SL+ L +++ G ++ms+++E++++ KIAA1697 1913 GRLNSLTTVLGQEVDRFNNLLKLIHTSLETLNKAIAGFVVMSEEMEKVYN 1962 sLlngrVPaWDmWakksyPslkpLgsWvtDLlkRirQLqeWtedsGGAkl s ln++VPa W + +yPslkpLgsWv DL R+ + + W + KIAA1697 1963 SFLNNQVPA--LWSNTAYPSLKPLGSWVKDLILRTSFVDLWLKR------ 2004 glPkvvWLsGFFnPQsFLTAimQsvARknkwPLDkLcLdteVtkkekeeq g+Pk++W+sGFF+PQ FLT++ Q+ ARk+ +P+D+L + + V +++ KIAA1697 2005 GQPKSYWISGFFFPQGFLTGTLQNHARKYNLPIDELSFKYSVI----PTY 2050 dskep......................PedGvyVhGLfLEGArWDsktgl + + + ++ + +++ + + + ++PedGv VhG+f++ rWD k+++ KIAA1697 2051 RDQAAvieaaktvqfgqelpmdmelpsPEDGVLVHGMFMDASRWDDKEMV 2100 laeskpKeLfspmPViwlkavpasdkqetkdvyecPVYktkaRggvLSTT +++++p + +++PV+++ + + ++ y cP+Ykt aR g+LSTT KIAA1697 2101 IEDALPGQMNPVLPVVHFEPQQN--YKPSPTLYHCPLYKTGARAGTLSTT 2148 GHStnyvftfnLktkedtpaskWilaGVALllq<-* GHStn+v+t++L++k +++ Wi +G ALl+q KIAA1697 2149 GHSTNFVVTVLLPSKR--SKDYWIAKGSALLCQ 2179 //