hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10080168/chunk_1/iprscan-20080502-10080168.nocrc
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Query sequence: KIAA1696
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00628.19.fs PHD-finger                                      64.2    3.4e-20   1
PF00628.19.ls PHD-finger                                      66.1    1.1e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00628.19.fs   1/1     445   490 ..     1    51 []    64.2  3.4e-20
PF00628.19.ls   1/1     445   490 ..     1    51 []    66.1  1.1e-16

Alignments of top-scoring domains:
PF00628.19.fs: domain 1 of 1, from 445 to 490: score 64.2, E = 3.4e-20
                   *->yCsvCgkeysdaggdllqCDgCdrwfHlaClgpplepeeipe..WyC
                      +CsvC+k      g ll CD+C r +Hl+Cl+ppl+   ip++ W+C
    KIAA1696   445    FCSVCRK-----SGQLLMCDTCSRVYHLDCLDPPLK--TIPKgmWIC 484  

                   peCkpk<-*
                   p+C+     
    KIAA1696   485 PRCQDQ    490  

PF00628.19.ls: domain 1 of 1, from 445 to 490: score 66.1, E = 1.1e-16
                   *->yCsvCgkeysdaggdllqCDgCdrwfHlaClgpplepeeipe..WyC
                      +CsvC+k      g ll CD+C r +Hl+Cl+ppl+   ip++ W+C
    KIAA1696   445    FCSVCRK-----SGQLLMCDTCSRVYHLDCLDPPLK--TIPKgmWIC 484  

                   peCkpk<-*
                   p+C+     
    KIAA1696   485 PRCQDQ    490  

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