hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10061982/chunk_1/iprscan-20080502-10061982.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1695 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00498 250.2 1.7e-70 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00498 1/1 660 1105 .. 1 499 [] 250.2 1.7e-70 Alignments of top-scoring domains: SM00498: domain 1 of 1, from 660 to 1105: score 250.2, E = 1.7e-70 *->pkkepkpkkkLKqLhWdklnslrssrqAps.NPseisegtvWettvn + + kkk +L+W ++++ p +N + +++ +W KIAA1695 660 GQPTFTKKKKTIRLFWNEVRPF----DWPCkN-NRRCREFLW----- 696 dkldeekfLynnldldeleelFaakektkkakkrsvsekksklkkkkvqq kl+ ++d+++le+lF++k+k+ + +k k+ + + ++q KIAA1695 697 SKLEPI-----KVDTSRLEHLFESKSKELSVSK------KT--AADGKRQ 733 nlkilDpkrsqnpplaIllrslhcklsfeetvikeailevDedvlsvdll ++ +lD+krs++ ++I l++l ++ ik ail++De +l+++ + KIAA1695 734 EIIVLDSKRSNA--INIGLTVL---PPPRT--IKIAILNFDEYALNKEGI 776 eqLlkfaPYsktkeelkklreykeddekspeeLaraeqiFlllisnLipy e+ l++ P t ee +k++e++ ++ + ++L+ aeq Fll++s+ i+ KIAA1695 777 EKILTMIP---TDEEKQKIQEAQLAN--PEIPLGSAEQ-FLLTLSS-ISE 819 leeRlnallfkanFeeevedLkpklekveaAceeLreSkkFrklLeliLa l++Rl++++fk+ +e + + + l ++++ +L ++k + +L +La KIAA1695 820 LSARLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGFILSTLLA 869 iGNyMNagsrrrrGqAqGFkLssLlkLsdvKsadnktTLLHflvkiirkk iGN++N + +A++F+Ls+L k vK++ k++LLH+++ + ++ KIAA1695 870 IGNFLN------GTNAKAFELSYLEKVPEVKDTVHKQSLLHHVCTMVVEN 913 ypdllkFysdlhhvdkaskvnleqlekdvkqlerqiknlEldkggLsdpe +pd ++ys+++++++++kv+++ql++++ q+er++k+ +++ ++e KIAA1695 914 FPDSSDLYSEIGAITRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAKHE 963 ghpddkflevmtpFlkaAkekyekLqkdlrdlktrfeklveyygedpkd. p + ++m++Flk+++e++ L+ ++r+ +rf+++ ++g p + KIAA1695 964 MKP--VLKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAi 1011 rdvspeeFFkdfneFlkeFkkaaeenlaiEskrkeeEeeerrakqlalrv r+v ++ F+ ++eF+ e+ +e++ + +k+k+++ er +k + KIAA1695 1012 REVNINKFCRIISEFALEYRTTRERV--LQQKQKRANHRER-NKTRG--- 1055 kette..yeqssskqkeneerrvernplmdfev.erdflgvldsllkelr k++t+++++++ss++ ++p+ + ++ + ++ ++ +lk ++ KIAA1695 1056 KMITDsgKFSGSSPAPP-------SQPQGLSYAeDAAEHENMKAVLKTSS 1098 tdssfer<-* + + + KIAA1695 1099 PSVEDAT 1105 //