hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09593230/chunk_1/iprscan-20080502-09593230.nocrc
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Query sequence: KIAA1691
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04906.4.ls Tweety                                         260.8    2.6e-75   1
PF04906.4.fs Tweety                                         254.9    1.6e-73   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04906.4.fs   1/1      60   448 ..     1   415 [.   254.9  1.6e-73
PF04906.4.ls   1/1      60   465 ..     1   434 []   260.8  2.6e-75

Alignments of top-scoring domains:
PF04906.4.fs: domain 1 of 1, from 60 to 448: score 254.9, E = 1.6e-73
                   *->lhptNsvFapewdeeYlQaLllvAslpAalLilSLlglliYLitrCC
                       + t s F+pe d  Y+QaLll+++ + a L l Ll+ll+Y    CC
    KIAA1691    60    WEATSSQFRPE-DTDYQQALLLLGAAALACLALDLLFLLFYSFWLCC 105  

                   dRPPEPHGkerppk..trrcVRRlsvsLiIitlmcCAaIGlGLYGNddvh
                    R      +++  + ++  c     +  iI+tl+c A+I +G+YGN +++
    KIAA1691   106 RR------RKSEEHldADCC--CTAWCVIIATLVCSAGIAVGFYGNGETS 147  

                   nGlsqllsagikkveslviTikdqteeleeaLetrvkteLkeLEdvvekp
                   +G+  +  ++ ++++ +v  ++d +  +   L+ +  + L +LE      
    KIAA1691   148 DGIHRATYSL-RHANRTVAGVQDRVWDTAVGLNHTAEPSLQTLERQ---- 192  

                   sknqtalsvlielvqivtgntdeAeaaAknlrgkLmkakqGddslSlvki
                         l  + e +++v+    + e  + +       ++     +Sl+ +
    KIAA1691   193 ------LAGRPEPLRAVQRLQGLLETLLGYTAA--IPFWRNT-AVSLEVL 233  

                   lkvgefyEsiRWpatValLsllLlvClvllvGvAkqSkcalvvFSaiGLl
                   ++ +++y  +RW++++ lL+l  ++Cl  lvG+ + Sk  lv     G l
    KIAA1691   234 AEQVDLYDWYRWLGYLGLLLLDVIICLLVLVGLIRSSKGILVGVCLLGVL 283  

                   vlvvsWLliGlyLassVAlgDFCsdPddyvvrkaqgelGlssevlsfYnl
                   +lv+sW+  Gl+La sV+ +DFC dPd yv++       ls ++l++Y  
    KIAA1691   284 ALVISWGALGLELAVSVGSSDFCVDPDAYVTKMVEEYSVLSGDILQYYLA 333  

                   CePavtNDpFqlRLaesrdLlnrArasieSqlqrlsevafpssaAiqksL
                   C P+  N pFq+ L  s   l      ++     l  v   + a    +L
    KIAA1691   334 CSPRAAN-PFQQKLSGSHKALVEMQDVVA---ELLRTVPWEQPA-TKDPL 378  

                   sAveeDLnvtlRlltqLsAlldCrslHkdyveAlRGLCeggLlGLslmMl
                   + v e Ln t+ +l  L+Al+dCrslH dyv Al G C +g++GL  + l
    KIAA1691   379 LRVQEVLNGTEVNLQHLTALVDCRSLHLDYVQALTGFCYDGVEGLIYLAL 428  

                   asLLlavlLtIllivdShaW<-*
                   +s+ +a +    +++++h+W   
    KIAA1691   429 FSFVTALMFSSIVCSVPHTW    448  

PF04906.4.ls: domain 1 of 1, from 60 to 465: score 260.8, E = 2.6e-75
                   *->lhptNsvFapewdeeYlQaLllvAslpAalLilSLlglliYLitrCC
                       + t s F+pe d  Y+QaLll+++ + a L l Ll+ll+Y    CC
    KIAA1691    60    WEATSSQFRPE-DTDYQQALLLLGAAALACLALDLLFLLFYSFWLCC 105  

                   dRPPEPHGkerppk..trrcVRRlsvsLiIitlmcCAaIGlGLYGNddvh
                    R      +++  + ++  c     +  iI+tl+c A+I +G+YGN +++
    KIAA1691   106 RR------RKSEEHldADCC--CTAWCVIIATLVCSAGIAVGFYGNGETS 147  

                   nGlsqllsagikkveslviTikdqteeleeaLetrvkteLkeLEdvvekp
                   +G+  +  ++ ++++ +v  ++d +  +   L+ +  + L +LE      
    KIAA1691   148 DGIHRATYSL-RHANRTVAGVQDRVWDTAVGLNHTAEPSLQTLERQ---- 192  

                   sknqtalsvlielvqivtgntdeAeaaAknlrgkLmkakqGddslSlvki
                         l  + e +++v+    + e  + +       ++     +Sl+ +
    KIAA1691   193 ------LAGRPEPLRAVQRLQGLLETLLGYTAA--IPFWRNT-AVSLEVL 233  

                   lkvgefyEsiRWpatValLsllLlvClvllvGvAkqSkcalvvFSaiGLl
                   ++ +++y  +RW++++ lL+l  ++Cl  lvG+ + Sk  lv     G l
    KIAA1691   234 AEQVDLYDWYRWLGYLGLLLLDVIICLLVLVGLIRSSKGILVGVCLLGVL 283  

                   vlvvsWLliGlyLassVAlgDFCsdPddyvvrkaqgelGlssevlsfYnl
                   +lv+sW+  Gl+La sV+ +DFC dPd yv++       ls ++l++Y  
    KIAA1691   284 ALVISWGALGLELAVSVGSSDFCVDPDAYVTKMVEEYSVLSGDILQYYLA 333  

                   CePavtNDpFqlRLaesrdLlnrArasieSqlqrlsevafpssaAiqksL
                   C P+  N pFq+ L  s   l      ++     l  v   + a    +L
    KIAA1691   334 CSPRAAN-PFQQKLSGSHKALVEMQDVVA---ELLRTVPWEQPA-TKDPL 378  

                   sAveeDLnvtlRlltqLsAlldCrslHkdyveAlRGLCeggLlGLslmMl
                   + v e Ln t+ +l  L+Al+dCrslH dyv Al G C +g++GL  + l
    KIAA1691   379 LRVQEVLNGTEVNLQHLTALVDCRSLHLDYVQALTGFCYDGVEGLIYLAL 428  

                   asLLlavlLtIllivdShaWilfsklpndYadvDEddPf<-*
                   +s+ +a +    +++++h+W   +  p+++ +  E +P    
    KIAA1691   429 FSFVTALMFSSIVCSVPHTWQQKRG-PDEDGE-EEAAPG    465  

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