hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09420751/chunk_1/iprscan-20080502-09420751.nocrc
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Query sequence: KIAA1681
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00314                                                  60.7    1.9e-13   1
SM00233                                                  52.6      5e-11   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00314     1/1     255   341 ..     1   102 []    60.7  1.9e-13
SM00233     1/1     383   493 ..     1    82 []    52.6    5e-11

Alignments of top-scoring domains:
SM00314: domain 1 of 1, from 255 to 341: score 60.7, E = 1.9e-13
                   *->dtyvlrVyvddlsavdpgqtyktlrvskrtTardViqqllekfhltd
                      ++ v+rV+++d       + +kt +v++r T+r+V+++l+ k h+  
    KIAA1681   255    KKLVIRVHMSD-------DSSKTMMVDERQTVRQVLDNLMDKSHCGY 294  

                   edpeeYvLvevlpsggkErvLlddenPlqlqklwprdaksprqsslrFvL
                     + +++Lve + + + Er+ +d+en ++++++w rd      s++++ +
    KIAA1681   295 --SLDWSLVETVSELQMERIFEDHENLVENLLNWTRD------SQNKLIF 336  

                   rkrdd<-*
                   ++r     
    KIAA1681   337 MERIE    341  

SM00233: domain 1 of 1, from 383 to 493: score 52.6, E = 5e-11
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk......kpkgsi
                      +++eG L  k ++k+swkkryf L+ + ++y  + + + ++++  ++
    KIAA1681   383    PEIEGVLWLKDdgKkSWKKRYFLLRASGIYYVPKGkakvsrDLVCFL 429  

                   pLsgcsvre.p............cFeivt.dr......tlllqAeseeer
                    L+++ v+ + + +++ + + + c+ +++++ +++++   +l++++  ++
    KIAA1681   430 QLDHVNVYYgQdyrnkykaptdyCLVLKHpQIqkksqyIKYLCCDDVRTL 479  

                   eeWvealqsaiaka<-*
                   ++Wv+ ++ a +     
    KIAA1681   480 HQWVNGIRIAKYGK    493  

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