hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09283910/chunk_1/iprscan-20080502-09283910.nocrc
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Query sequence: KIAA1673
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  56.1    4.4e-12   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/2     456   528 ..     1   121 []    32.7  4.9e-05
SM00360    2/2     564   637 ..     1   121 []    23.4    0.013

Alignments of top-scoring domains:
SM00360: domain 1 of 2, from 456 to 528: score 32.7, E = 4.9e-05
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      ++fVg+L  ppd++e+++   F              ++fG++  v+ 
    KIAA1673   456    KVFVGGL--PPDIDEDEITASF--------------RRFGPL-IVDW 485  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   +++ +++++ +                  +kG+aF  F de+++++   i
    KIAA1673   486 PHKAESKSYFP------------------PKGYAFLLFQDESSVQAL--I 515  

                   ealnaskGkeledgGrptlglrVe<-*
                   +a           ++ +   l++    
    KIAA1673   516 DACI--------EEDGK---LYLC    528  

SM00360: domain 2 of 2, from 564 to 637: score 23.4, E = 0.013
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      t+fVg++  p      +L  +              ++ +G v ++ i
    KIAA1673   564    TIFVGGV--PRPLRAVELAMIM-------------DRLYGGVCYAGI 595  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                    +d++                      + +kG + V F+++++  +A  i
    KIAA1673   596 DTDPE---------------------LKYPKGAGRVAFSNQQSYIAA--I 622  

                   ealnaskGkeledgGrptlglrVe<-*
                   +a       +l  +  +   +  +   
    KIAA1673   623 SARF----VQL--QHGE---IDKR    637  

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