hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09265728/chunk_1/iprscan-20080502-09265728.nocrc
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Query sequence: KIAA1672
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00054                                                  32.8    4.8e-05   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00054    1/3      33    61 ..     1    29 []    17.1      1.2
SM00054    2/3     219   247 ..     1    29 []     9.4       11
SM00054    3/3     326   354 ..     1    29 []     6.2       27

Alignments of top-scoring domains:
SM00054: domain 1 of 3, from 33 to 61: score 17.1, E = 1.2
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e++++++ +D+ g G I+++Ef++ l      
    KIAA1672    33    EFEKLWARYDTEGKGHITYQEFLQKLGIN    61   

SM00054: domain 2 of 3, from 219 to 247: score 9.4, E = 11
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       l  aF+ +Dk   G++   Ef ++lk +   
    KIAA1672   219    ALSTAFSALDKEDTGFVKATEFGQVLKDF    247  

SM00054: domain 3 of 3, from 326 to 354: score 6.2, E = 27
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       + + F+ fD+ +  +I+ eEf+a++ +    
    KIAA1672   326    AITQEFENFDTMKTNTISREEFRAICNRR    354  

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