hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09265728/chunk_1/iprscan-20080502-09265728.nocrc
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Query sequence: KIAA1672
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                         50.5    5.1e-12   4
PF00036.22.fs EF hand                                         43.6    7.7e-11   4
PF08976.1.fs Domain of unknown function (DUF1880)            15.6    1.3e-06   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/4      33    56 ..     1    24 [.    18.3  0.00062
PF00036.22.fs   3/4     219   247 ..     1    29 []    11.4    0.048
PF00036.22.fs   4/4     326   354 ..     1    29 []    10.3    0.093

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 4, from 33 to 56: score 18.3, E = 0.00062
                   *->elkeaFkefDkDgDGkIsfeEfka<-*
                      e++++++ +D+ g G I+++Ef++   
    KIAA1672    33    EFEKLWARYDTEGKGHITYQEFLQ    56   

PF00036.22.fs: domain 3 of 4, from 219 to 247: score 11.4, E = 0.048
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       l  aF+ +Dk   G++   Ef ++lk++   
    KIAA1672   219    ALSTAFSALDKEDTGFVKATEFGQVLKDF    247  

PF00036.22.fs: domain 4 of 4, from 326 to 354: score 10.3, E = 0.093
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       + + F+ fD+ +  +Is+eEf+a++ +    
    KIAA1672   326    AITQEFENFDTMKTNTISREEFRAICNRR    354  

//