hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09102699/chunk_1/iprscan-20080502-09102699.nocrc
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Query sequence: KIAA1662
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  78.7      7e-19   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1    1067  1177 ..     1    82 []    78.7    7e-19

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 1067 to 1177: score 78.7, E = 7e-19
                   *->vikeGwLlkks..............k.swkkryfvLfngvLlyyksk
                        k+Gw++++  ++ +++++ ++++ ++wkk++fvL++++L yy+++
    KIAA1662  1067    NFKKGWMSILDepgeppspsltttsTsQWKKHWFVLTDSSLKYYRDS 1113 

                   ......kpkgsipLsgc.svre.p.....cFeivt.drtlllqAeseeer
                   + ++ +++ g+i+L++c+ v+e +  ++ +F+i+t+d +++l+A ++  r
    KIAA1662  1114 taeeadELDGEIDLRSCtDVTEyAvqrnyGFQIHTkDAVYTLSAMTSGIR 1163 

                   eeWvealqsaiaka<-*
                   + W+eal++ +++    
    KIAA1662  1164 RNWIEALRKTVRPT    1177 

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