hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-08442411/chunk_1/iprscan-20080502-08442411.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1646 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00781.14.fs Diacylglycerol kinase catalytic domain (pres 106.2 5.6e-31 1 PF00781.14.ls Diacylglycerol kinase catalytic domain (pres 108.1 2.3e-29 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00781.14.fs 1/1 76 221 .. 1 152 [] 106.2 5.6e-31 PF00781.14.ls 1/1 76 221 .. 1 152 [] 108.1 2.3e-29 Alignments of top-scoring domains: PF00781.14.fs: domain 1 of 1, from 76 to 221: score 106.2, E = 5.6e-31 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv++NP++G+g+gk yerkv +++ +a +++++++te++++ KIAA1646 76 HLLVFINPFGGKGQGK--RIYERKVAPLFTLASITTDIIVTEHANQA 120 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakai... ++ +e+ +++++ D++v++GGDG+++eV+ gL gr r++ ++++ KIAA1646 121 KETLYEI--NIDKY----DGIVCVGGDGMFSEVLHGLIGRTQRSAGVdqn 164 ..Rifprpp...lGiiPlGTgNdfAraLgipldpegAkaalaallailgq ++R++ p + ++GiiP+G++ ++ + d e+ +al++++g+ KIAA1646 165 hpRAVLVPSslrIGIIPAGSTDCVCYSTVGTSDAET-----SALHIVVGD 209 ilcradvvvldrw<-* l ++dv+ + KIAA1646 210 SL-AMDVSSVHHN 221 PF00781.14.ls: domain 1 of 1, from 76 to 221: score 108.1, E = 2.3e-29 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv++NP++G+g+gk yerkv +++ +a +++++++te++++ KIAA1646 76 HLLVFINPFGGKGQGK--RIYERKVAPLFTLASITTDIIVTEHANQA 120 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakai... ++ +e+ +++++ D++v++GGDG+++eV+ gL gr r++ ++++ KIAA1646 121 KETLYEI--NIDKY----DGIVCVGGDGMFSEVLHGLIGRTQRSAGVdqn 164 ..Rifprpp...lGiiPlGTgNdfAraLgipldpegAkaalaallailgq ++R++ p + ++GiiP+G++ ++ + d e+ +al++++g+ KIAA1646 165 hpRAVLVPSslrIGIIPAGSTDCVCYSTVGTSDAET-----SALHIVVGD 209 ilcradvvvldrw<-* l ++dv+ + KIAA1646 210 SL-AMDVSSVHHN 221 //