hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08424789/chunk_1/iprscan-20080502-08424789.nocrc
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Query sequence: KIAA1645
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 115.7    5.3e-30   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/6      68   112 ..     1    46 []    19.8     0.36
SM00320    2/6     115   155 ..     1    46 []    23.5    0.029
SM00320    3/6     214   253 ..     1    46 []     5.1       78
SM00320    4/6     256   295 ..     1    46 []    16.3      1.3
SM00320    5/6     301   340 ..     1    46 []    12.8      4.6
SM00320    6/6     343   381 ..     1    46 []    38.1  1.2e-06

Alignments of top-scoring domains:
SM00320: domain 1 of 6, from 68 to 112: score 19.8, E = 0.36
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++ + ++l+g ++  pV+++ f+   ++  +  ll+sgs+ g +++W
    KIAA1645    68    PpDPQFVLRGTQS--PVHALHFCEGAQA-QGRPLLFSGSqSGLVHIW 111  

                   d<-*
                   +   
    KIAA1645   112 S    112  

SM00320: domain 2 of 6, from 115 to 155: score 23.5, E = 0.029
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t++ + tl+gH g + Vt ++  p g      ++l+s ++D +++lW
    KIAA1645   115    TrRAVTTLDGHGG-QCVTWLQTLPQG------RQLLSQGrDLKLCLW 154  

                   d<-*
                   d   
    KIAA1645   155 D    155  

SM00320: domain 3 of 6, from 214 to 253: score 5.1, E = 78
                   *->t.kllrtlk.gHtgespVtsvafspdggssdspnllasgs.Dgtirl
                      ++k  ++l        + +  + s+         ll++g +Dg++ l
    KIAA1645   214    KpKADAKLGmPMCL--RLWQADCSSR-------PLLLAGYeDGSVVL 251  

                   Wd<-*
                   Wd   
    KIAA1645   252 WD    253  

SM00320: domain 4 of 6, from 256 to 295: score 16.3, E = 1.3
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++k+++ + +H+   pV +++f++         + +sgs  + + +W
    KIAA1645   256    EqKVCSRIACHEE--PVMDLDFDSQK------ARGISGSaGKALAVW 294  

                   d<-*
                   +   
    KIAA1645   295 S    295  

SM00320: domain 5 of 6, from 301 to 340: score 12.8, E = 4.6
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                        ++  t +  +   ++  v++ pd       ++la++++D+ ir++
    KIAA1645   301    AlQVRGTHELTNP--GIAEVTIRPDR------KILATAGwDHRIRVF 339  

                   d<-*
                   +   
    KIAA1645   340 H    340  

SM00320: domain 6 of 6, from 343 to 381: score 38.1, E = 1.2e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t ++l++l  H++  +V +vaf  dg       lla+gs+D  i lW
    KIAA1645   343    TmQPLAVLAFHSA--AVQCVAFTADG-------LLAAGSkDQRISLW 380  

                   d<-*
                   +   
    KIAA1645   381 S    381  

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