hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08150336/chunk_1/iprscan-20080502-08150336.nocrc
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Query sequence: KIAA1629
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 266.9    1.5e-75  15

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/15    644   664 ..     1    23 []     7.1       50
SM00355      2/15    672   696 ..     1    23 []    11.9       14
SM00355      3/15    782   802 ..     1    23 []     8.2       37
SM00355      4/15    811   833 ..     1    23 []    16.2      4.6
SM00355      5/15    839   863 ..     1    23 []    10.1       23
SM00355      6/15    870   893 ..     1    23 []    25.0    0.011
SM00355      7/15    898   921 ..     1    23 []    19.6     0.43
SM00355      8/15    933   955 ..     1    23 []    22.0    0.083
SM00355      9/15    964   987 ..     1    23 []    21.0     0.17
SM00355     10/15   1053  1076 ..     1    23 []    15.7      5.4
SM00355     11/15   1083  1106 ..     1    23 []    21.2     0.14
SM00355     12/15   1113  1139 ..     1    23 []    20.0     0.34
SM00355     13/15   1202  1224 ..     1    23 []    17.8      1.5
SM00355     14/15   1231  1254 ..     1    23 []    22.3    0.066
SM00355     15/15   1292  1314 ..     1    23 []    28.7   0.0008

Alignments of top-scoring domains:
SM00355: domain 1 of 15, from 644 to 664: score 7.1, E = 50
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC + Cg sf  +++L++H+      
    KIAA1629   644    YKCLE-CGDSFALEkSLTQHYD--    664  

SM00355: domain 2 of 15, from 672 to 696: score 11.9, E = 14
                   *->ykCpigCg..ksfssk.aLkrHmrvH<-*
                       +C++ C ++ +f +k +L  H r H   
    KIAA1629   672    VTCNH-CTknLVFYNKcSLLSHARGH    696  

SM00355: domain 3 of 15, from 782 to 802: score 8.2, E = 37
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC + C+++f ++++L  H +     
    KIAA1629   782    LKCLE-CNEVFQDEtSLATHFQ--    802  

SM00355: domain 4 of 15, from 811 to 833: score 16.2, E = 4.6
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C+i C++  +++ ++  H+r+H   
    KIAA1629   811    KTCTI-CQMLLPNQcSYASHQRIH    833  

SM00355: domain 5 of 15, from 839 to 863: score 10.1, E = 23
                   *->ykCpigCgksfsskaLkrHmr...vH<-*
                      y+Cp+ Cg  ++s +++ H+ ++  H   
    KIAA1629   839    YTCPE-CGAICRSVHFQTHVTkncLH    863  

SM00355: domain 6 of 15, from 870 to 893: score 25.0, E = 0.011
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C + C+ ++s+  aLk H++++H   
    KIAA1629   870    FRCVH-CNVVYSDVaALKSHIQgSH    893  

SM00355: domain 7 of 15, from 898 to 921: score 19.6, E = 0.43
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ykCpi C++ f+s+++   H +++H   
    KIAA1629   898    YKCPI-CPMAFKSApSTHSHAYtQH    921  

SM00355: domain 8 of 15, from 933 to 955: score 22.0, E = 0.083
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ C+ +f+ ++ L rH  +H   
    KIAA1629   933    YKCSM-CDTVFTLQtLLYRHFDQH    955  

SM00355: domain 9 of 15, from 964 to 987: score 21.0, E = 0.17
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      +kCp  C+  + +k+ +  H++++H   
    KIAA1629   964    FKCPD-CSLLYAQKqLMMDHIKsMH    987  

SM00355: domain 10 of 15, from 1053 to 1076: score 15.7, E = 5.4
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C + C+  f +++ ++ H+r+ H   
    KIAA1629  1053    WTCWE-CDCLFMQRdVYISHVRkEH    1076 

SM00355: domain 11 of 15, from 1083 to 1106: score 21.2, E = 0.14
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + C + C+ksfss ++L rH r +H   
    KIAA1629  1083    HPCRQ-CDKSFSSShSLCRHNRiKH    1106 

SM00355: domain 12 of 15, from 1113 to 1139: score 20.0, E = 0.34
                   *->ykCpigCg...ksfssk.aLkrHmr.vH<-*
                      y C++ C++++++f+ +  L++H++ +H   
    KIAA1629  1113    YACSH-CPdsrRTFTKRlMLEKHVQlMH    1139 

SM00355: domain 13 of 15, from 1202 to 1224: score 17.8, E = 1.5
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC + Cg+++ +  ++ +H+ +H   
    KIAA1629  1202    HKCAV-CGFTTENLlQFHEHIPQH    1224 

SM00355: domain 14 of 15, from 1231 to 1254: score 22.3, E = 0.066
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C + Cg +++s+ +L rH+  vH   
    KIAA1629  1231    YQCRE-CGLCYTSHvSLSRHLFiVH    1254 

SM00355: domain 15 of 15, from 1292 to 1314: score 28.7, E = 0.0008
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       kC++ C k+f ++ aL+ Hmr+H   
    KIAA1629  1292    RKCKV-CAKTFETEaALNTHMRTH    1314 

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