hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08113835/chunk_1/iprscan-20080502-08113835.nocrc
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Query sequence: KIAA1627
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05063.5.ls MT-A70                                         323.3    4.1e-94   1
PF05063.5.fs MT-A70                                         321.4    1.5e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05063.5.fs   1/1     198   375 ..     1   195 []   321.4  1.5e-93
PF05063.5.ls   1/1     198   375 ..     1   195 []   323.3  4.1e-94

Alignments of top-scoring domains:
PF05063.5.fs: domain 1 of 1, from 198 to 375: score 321.4, E = 1.5e-93
                   *->fdvIiaDPPWrnksrarkkrtkaelpystmnddeLlaLpipeladkG
                      fdvI+++PP+++++r    +t+++++++++++d++++L+i+e+a++ 
    KIAA1627   198    FDVILLEPPLEEYYR----ETGITANEKCWTWDDIMKLEIDEIAAP- 239  

                   rslifLWcTnrelieaavkrecLkkWGfrlveeitWlKtntdgepifdkt
                   rs+ifLWc++ e++++  +r+cL+kWG+r++e+i+W+Ktn +++p+++kt
    KIAA1627   240 RSFIFLWCGSGEGLDL--GRVCLRKWGYRRCEDICWIKTN-KNNPGKTKT 286  

                   lrsghwlrhpkEhcLlgvkGnpkrsygkdfinanveLtndtdlIissvpe
                   l+++++++++kEhcL+g+kG++krs+++dfi+anv    d+dlIi+++pe
    KIAA1627   287 LDPKAVFQRTKEHCLMGIKGTVKRSTDGDFIHANV----DIDLIITEEPE 332  

                   rehSrKPdelfeliehLcldkdedlrnkLELFARshnlrPgWltvGne<-
                   +++++KP+e+f++ieh+c    +++r +L+LF+R++++rPgWltvG++  
    KIAA1627   333 IGNIEKPVEIFHIIEHFC----LGRR-RLHLFGRDSTIRPGWLTVGPT   375  

                   *
                    
    KIAA1627     -   -    

PF05063.5.ls: domain 1 of 1, from 198 to 375: score 323.3, E = 4.1e-94
                   *->fdvIiaDPPWrnksrarkkrtkaelpystmnddeLlaLpipeladkG
                      fdvI+++PP+++++r    +t+++++++++++d++++L+i+e+a++ 
    KIAA1627   198    FDVILLEPPLEEYYR----ETGITANEKCWTWDDIMKLEIDEIAAP- 239  

                   rslifLWcTnrelieaavkrecLkkWGfrlveeitWlKtntdgepifdkt
                   rs+ifLWc++ e++++  +r+cL+kWG+r++e+i+W+Ktn +++p+++kt
    KIAA1627   240 RSFIFLWCGSGEGLDL--GRVCLRKWGYRRCEDICWIKTN-KNNPGKTKT 286  

                   lrsghwlrhpkEhcLlgvkGnpkrsygkdfinanveLtndtdlIissvpe
                   l+++++++++kEhcL+g+kG++krs+++dfi+anv    d+dlIi+++pe
    KIAA1627   287 LDPKAVFQRTKEHCLMGIKGTVKRSTDGDFIHANV----DIDLIITEEPE 332  

                   rehSrKPdelfeliehLcldkdedlrnkLELFARshnlrPgWltvGne<-
                   +++++KP+e+f++ieh+c    +++r +L+LF+R++++rPgWltvG++  
    KIAA1627   333 IGNIEKPVEIFHIIEHFC----LGRR-RLHLFGRDSTIRPGWLTVGPT   375  

                   *
                    
    KIAA1627     -   -    

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