hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07513843/chunk_1/iprscan-20080502-07513843.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1615
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 248.8    4.4e-70   9

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/9     203   225 ..     1    23 []    29.0  0.00065
SM00355      2/9     231   253 ..     1    23 []    25.8   0.0061
SM00355      3/9     259   281 ..     1    23 []    26.4   0.0041
SM00355      4/9     287   309 ..     1    23 []    24.1    0.019
SM00355      5/9     315   337 ..     1    23 []    32.1  7.4e-05
SM00355      6/9     343   365 ..     1    23 []    25.1   0.0096
SM00355      7/9     371   393 ..     1    23 []    27.2   0.0023
SM00355      8/9     399   421 ..     1    23 []    31.6   0.0001
SM00355      9/9     427   449 ..     1    23 []    27.5   0.0019

Alignments of top-scoring domains:
SM00355: domain 1 of 9, from 203 to 225: score 29.0, E = 0.00065
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgksf+ + +L+rH+++H   
    KIAA1615   203    FECSF-CGKSFRVHaQLTRHQKIH    225  

SM00355: domain 2 of 9, from 231 to 253: score 25.8, E = 0.0061
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC + Cgk f+ +++L++H+r+H   
    KIAA1615   231    YKCME-CGKDFRFHsQLTEHQRIH    253  

SM00355: domain 3 of 9, from 259 to 281: score 26.4, E = 0.0041
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC + C k+f+  ++L++H+r+H   
    KIAA1615   259    YKCMH-CEKVFRISsQLIEHQRIH    281  

SM00355: domain 4 of 9, from 287 to 309: score 24.1, E = 0.019
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cgk f   ++L rH+r+H   
    KIAA1615   287    YACKE-CGKAFGVCrELARHQRIH    309  

SM00355: domain 5 of 9, from 315 to 337: score 32.1, E = 7.4e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+  Cgk+f++ ++L+rH+r+H   
    KIAA1615   315    YECKA-CGKVFRNSsSLTRHQRIH    337  

SM00355: domain 6 of 9, from 343 to 365: score 25.1, E = 0.0096
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ C k f   ++L+rH r+H   
    KIAA1615   343    YKCKE-CEKAFGVGsELTRHERIH    365  

SM00355: domain 7 of 9, from 371 to 393: score 27.2, E = 0.0023
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f+  +aL++H+r+H   
    KIAA1615   371    YECKE-CGKFFRLTsALIQHQRIH    393  

SM00355: domain 8 of 9, from 399 to 421: score 31.6, E = 0.0001
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f++ +aL++H+r+H   
    KIAA1615   399    YECKV-CGKAFRHSsALTEHQRIH    421  

SM00355: domain 9 of 9, from 427 to 449: score 27.5, E = 0.0019
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+  Cgk f++ +++++H+r+H   
    KIAA1615   427    YECKA-CGKAFRHSsSFTKHQRIH    449  

//