hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07464876/chunk_1/iprscan-20080502-07464876.nocrc
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Query sequence: KIAA1612
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00702                                                 120.8    1.5e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00702    1/1      56   246 ..     1   220 []   120.8  1.5e-31

Alignments of top-scoring domains:
SM00702: domain 1 of 1, from 56 to 246: score 120.8, E = 1.5e-31
                   *->Pglvvyhdflsdkeceklleeaepll..rgevtdgdggpndk...E.
                      P+ + +  + +d++ +++++ +++  +  + ++++ ++   ++ +E+
    KIAA1612    56    PFSHEVIVMDMDPFLHCVIPNFIQSQdfLEGLQKELMN---LdfhEk 99   

                   .g.etdpketsqyRtsdngtwlklseLkLlsadlgdpvierirqrladlt
                    +++++++++++++   +  +++            + ++e +r++l+d++
    KIAA1612   100 yNdLYKFQQSDDLKKR-REPHISTLR---------KILFEDFRSWLSDIS 139  

                   ...llsaeelqvarYgpnGghYepHvDnfrddenafgelmtyKeCwEPAy
                   + +l+s++++++a+Y++  + +++H+D ++                    
    KIAA1612   140 kidLESTIDMSCAKYEF-TDALLCHDDELE-------------------- 168  

                   GnRiaTfllYLnnewdveeGGetvFpglnl....ksvvatvkPkkGsllf
                    +R++ f+lYL + wd + GG++ ++ ++ + ++k++v+++ P ++ l+f
    KIAA1612   169 -GRRIAFILYLVPPWDRSMGGTLDLYSIDEhfqpKQIVKSLIPSWNKLVF 217  

                   fynldgdgekdvLHRlrslHavcPVtv..GsRwaingWir<-*
                   f +++            s+H+v +V+++++sR++i gW++   
    KIAA1612   218 FEVSP-----------VSFHQVSEVLSeeKSRLSISGWFH    246  

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