hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07464876/chunk_1/iprscan-20080502-07464876.nocrc
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Query sequence: KIAA1612
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF03171.10.ls 2OG-Fe(II) oxygenase superfamily            13.1     0.0057   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF03171.10.ls   1/1     145   247 ..     1   112 []    13.1   0.0057

Alignments of top-scoring domains:
PF03171.10.ls: domain 1 of 1, from 145 to 247: score 13.1, E = 0.0057
                   *->taeslrvnyYppvPcpqeaaPdlglglgpHtDne.nriiTillqlsd
                      ++ ++ +++Y+            ++ l  H D  + r i ++l+l  
    KIAA1612   145    STIDMSCAKYE-----------FTDALLCHDDELeGRRIAFILYLVP 180  

                   pd.kdgvggLqflkdd......widvppgPgalvvniGdqlqvlsnGryk
                   p++   +g+L ++  d++ +++ i    +P ++ + ++ +         +
    KIAA1612   181 PWdRSMGGTLDLYSIDehfqpkQIVKSLIPSWNKLVFFEVS--------P 222  

                   svlHrVlpnt..egeRiSiafflrp<-*
                    ++H V  + ++e++R+Si  +++    
    KIAA1612   223 VSFHQVSEVLseEKSRLSISGWFHG    247  

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