hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07350766/chunk_1/iprscan-20080502-07350766.nocrc
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Query sequence: KIAA1605
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04685.4.fs Protein of unknown function, DUF608            484.0   1.7e-142   1
PF04685.4.ls Protein of unknown function, DUF608            461.4   1.1e-135   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04685.4.fs   1/1     566   880 ..     1   386 [.   484.0 1.7e-142
PF04685.4.ls   1/1     566   915 ..     1   443 []   461.4 1.1e-135

Alignments of top-scoring domains:
PF04685.4.fs: domain 1 of 1, from 566 to 880: score 484.0, E = 1.7e-142
                   *->GrFaylEgpevyrmlnTiDVhfeYgLSfalLmlFPkLElSiqrdFar
                      GrF+ylEg e yrm+nT+DVhf Y+ Sfal+ml+PkLElS q d a 
    KIAA1605   566    GRFGYLEGQE-YRMYNTYDVHF-YA-SFALIMLWPKLELSLQYDMAL 609  

                   avlkeDpkevvllsdgelvtLmkYkeerKvdgavPHDLGkhddtikkiik
                   a l+eD +++  l +g +++       +K ++ +PHD+G +d        
    KIAA1605   610 ATLREDLTRRRYLMSGVMAP-------VKRRNVIPHDIGDPD-------- 644  

                   etvedPweetNaYilhsLtvdtyrWKDLNPkFVLlvYRDfkLlaTgDreG
                      + Pw ++NaY +h    dt  WKDLN+kFVL+vYRD+    TgD + 
    KIAA1605   645 ---DEPWLRVNAYLIH----DTADWKDLNLKFVLQVYRDYY--LTGDQN- 684  

                   qFLeevypsvvkaiDdylertfDkDNLPYLtLPsGieWmRhvnnmLkvsD
                    FL++ +p++ +++ ++++  fDkD                         
    KIAA1605   685 -FLKDMWPVCLAVM-ESEMK-FDKDH------------------------ 707  

                   ahkDglieneGfpDQTYDaWsmkGvSaYcgsLWiAALeAaiemakllGdn
                      Dglien G +DQTYD+W  +G SaYcg+LW+AA   +  ma l G +
    KIAA1605   708 ---DGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGAQ 754  

                   niadtDLDameiqtaialyeeklekAkeayekkLWNGeYFnnWyDsssde
                    i+d             ++++ l+ + eaye+ LWNG+Y+n  yDsss  
    KIAA1605   755 DIQD-------------KFSSILSRGQEAYERLLWNGRYYN--YDSSSRP 789  

                   nsksilADQLaGqWYarllGL....ppivdedkiksALesIykyNvmkfk
                   +s+s++ DQ aGqW+  ++GL++++ +++       AL++I+++Nv+ f+
    KIAA1605   790 QSRSVMSDQCAGQWFLKACGLgegdTEVFPTQHVVRALQTIFELNVQAFA 839  

                   agklGavNgevlpdGkVdgPssvQsrevWpGitYalAAhMiqk<-*
                   +g +GavNg + p G++d+ ssvQs evW G++Y+lAA+Miq+   
    KIAA1605   840 GGAMGAVNG-MQPHGVPDK-SSVQSDEVWVGVVYGLAATMIQE    880  

PF04685.4.ls: domain 1 of 1, from 566 to 915: score 461.4, E = 1.1e-135
                   *->GrFaylEgpevyrmlnTiDVhfeYgLSfalLmlFPkLElSiqrdFar
                      GrF+ylEg e yrm+nT+DVhf Y+ Sfal+ml+PkLElS q d a 
    KIAA1605   566    GRFGYLEGQE-YRMYNTYDVHF-YA-SFALIMLWPKLELSLQYDMAL 609  

                   avlkeDpkevvllsdgelvtLmkYkeerKvdgavPHDLGkhddtikkiik
                   a l+eD +++  l +g +++       +K ++ +PHD+G +d        
    KIAA1605   610 ATLREDLTRRRYLMSGVMAP-------VKRRNVIPHDIGDPD-------- 644  

                   etvedPweetNaYilhsLtvdtyrWKDLNPkFVLlvYRDfkLlaTgDreG
                      + Pw ++NaY +h    dt  WKDLN+kFVL+vYRD+    TgD + 
    KIAA1605   645 ---DEPWLRVNAYLIH----DTADWKDLNLKFVLQVYRDYY--LTGDQN- 684  

                   qFLeevypsvvkaiDdylertfDkDNLPYLtLPsGieWmRhvnnmLkvsD
                    FL++ +p++ +++ ++++  fDkD                         
    KIAA1605   685 -FLKDMWPVCLAVM-ESEMK-FDKDH------------------------ 707  

                   ahkDglieneGfpDQTYDaWsmkGvSaYcgsLWiAALeAaiemakllGdn
                      Dglien G +DQTYD+W  +G SaYcg+LW+AA   +  ma l G +
    KIAA1605   708 ---DGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGAQ 754  

                   niadtDLDameiqtaialyeeklekAkeayekkLWNGeYFnnWyDsssde
                    i+d             ++++ l+ + eaye+ LWNG+Y+n  yDsss  
    KIAA1605   755 DIQD-------------KFSSILSRGQEAYERLLWNGRYYN--YDSSSRP 789  

                   nsksilADQLaGqWYarllGL....ppivdedkiksALesIykyNvmkfk
                   +s+s++ DQ aGqW+  ++GL++++ +++       AL++I+++Nv+ f+
    KIAA1605   790 QSRSVMSDQCAGQWFLKACGLgegdTEVFPTQHVVRALQTIFELNVQAFA 839  

                   agklGavNgevlpdGkVdgPssvQsrevWpGitYalAAhMiqkGmveeaf
                   +g +GavNg + p G++d+ ssvQs evW G++Y+lAA+Miq+ +   +f
    KIAA1605   840 GGAMGAVNG-MQPHGVPDK-SSVQSDEVWVGVVYGLAATMIQE-LLPSGF 886  

                   ktakniyeaiwsngglgyqFqtpegwtavdeityrslhYmrplaiWaikw
                      +  +  i+s    + ++        +d     s       +i+ +  
    KIAA1605   887 ---CLWVIVISST--CWELLEG------KD-----S-----TASIYPVEV 915  

                   <-*
                      
    KIAA1605     -     -    

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