hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07182539/chunk_1/iprscan-20080502-07182539.nocrc
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Query sequence: KIAA1595
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00490                                                  98.5    8.1e-25   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00490      1/1     152   234 ..     1    86 []    98.5  8.1e-25

Alignments of top-scoring domains:
SM00490: domain 1 of 1, from 152 to 234: score 98.5, E = 8.1e-25
                   *->delaelLkellkdpgikvarlHGglsqeeReeilekFrkgkikvLva
                      +   + L+ l+k  g+k++++HG +++ +R +i+ +Frk  + +Lv+
    KIAA1595   152    EYYGKALEVLVK--GVKIMCIHG-KMKYKRNKIFMEFRKLQSGILVC 195  

                   TdvaerGlDipgvdlVInydlpwspasyiQRiGRaGRaG<-*
                   Tdv++rG+Dip+v++V +yd+p + + +++R GR++R+G   
    KIAA1595   196 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIG    234  

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