hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07150094/chunk_1/iprscan-20080502-07150094.nocrc
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Query sequence: KIAA1593
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00119                                                 469.9   1.3e-136   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00119    1/1     624   953 .]     1   407 []   469.9 1.3e-136

Alignments of top-scoring domains:
SM00119: domain 1 of 1, from 624 to 953: score 469.9, E = 1.3e-136
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      +  ++d kk+    L+++f      vgE ++D+GGv++EFf l+ +e
    KIAA1593   624    KTKNIDYKKP----LKVIF------VGEDAVDAGGVRKEFFLLIMRE 660  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   l++p +yg+Fry+++++              l +++   ++ ++      
    KIAA1593   661 LLDP-KYGMFRYYEDSR--------------LIWFSDKTFEDSD------ 689  

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   +F++iG+++G+A+y+ +++Dl+F++++yKkLL+k+    ++l+Dl++l P
    KIAA1593   690 LFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKK----PSLDDLKELMP 735  

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                    +++s+++L                   l++ ++++e+ ++L+F+i +e+
    KIAA1593   736 DVGRSMQQL-------------------LDYPEDDIEETFCLNFTITVEN 766  

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    fg  +v EL+ +G+++ V+++N++E+V+ +++y++nk+v+  ++AF+ G
    KIAA1593   767 -FGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAG 815  

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F++V+  + L  lF+++EL+ ++ G+  ++d+++L++nTey+g+Y+++++
    KIAA1593   816 FHKVCGGKVLL-LFQPNELQAMVIGNT-NYDWKELEKNTEYKGEYWAEHP 863  

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   ti   k FWev++++  e+++ +L F+TGs+r+P  + G+++L       
    KIAA1593   864 TI---KIFWEVFHELPLEKKKQFLLFLTGSDRIP--ILGMKSL------- 901  

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                   k+ I+  g     ++++LP +hTCfN+L+LP+Y+ ke+Lr+KL +AI   
    KIAA1593   902 KLVIQSTGG----GEEYLPVSHTCFNLLDLPKYTEKETLRSKLIQAIDH- 946  

                   RiggeGFgls<-*
                       eGF+l    
    KIAA1593   947 ---NEGFSLI    953  

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