hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06595869/chunk_1/iprscan-20080502-06595869.nocrc
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Query sequence: KIAA1584
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 111.3    1.1e-28   9

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/9     256   276 ..     1    23 []     4.9       89
SM00355      2/9     337   359 ..     1    23 []    12.9       11
SM00355      3/9     374   397 ..     1    23 []    16.2      4.6
SM00355      4/9     404   427 ..     1    23 []    22.5    0.059
SM00355      5/9     434   457 ..     1    23 []    23.6    0.028
SM00355      6/9     463   485 ..     1    23 []     9.3       28
SM00355      7/9     491   513 ..     1    23 []     8.0       40
SM00355      8/9     660   683 ..     1    23 []    11.9       14
SM00355      9/9     706   730 ..     1    23 []     2.1  1.8e+02

Alignments of top-scoring domains:
SM00355: domain 1 of 9, from 256 to 276: score 4.9, E = 89
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                        Cp+ C+ +f+  + Lk+Hm+     
    KIAA1584   256    RACPK-CNIHFNLLdPLKNHMK--    276  

SM00355: domain 2 of 9, from 337 to 359: score 12.9, E = 11
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC   C k  ++   + +Hm+ H   
    KIAA1584   337    FKCFS-CLKILKNNiRFMNHMKHH    359  

SM00355: domain 3 of 9, from 374 to 397: score 16.2, E = 4.6
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C++ C ++f+++ +L+ H+ ++H   
    KIAA1584   374    TTCQH-CYRQFPTPfQLQCHIEsTH    397  

SM00355: domain 4 of 9, from 404 to 427: score 22.5, E = 0.059
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                        C+i C  sf +++ L +Hm++ H   
    KIAA1584   404    TICKI-CELSFETEhVLLQHMKdNH    427  

SM00355: domain 5 of 9, from 434 to 457: score 23.6, E = 0.028
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C++ C+++ ss ++ + H r++H   
    KIAA1584   434    YVCQV-CNYRSSSFsDVETHFRtSH    457  

SM00355: domain 6 of 9, from 463 to 485: score 9.3, E = 28
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + Cp+ C k+ + ++ + +H+++H   
    KIAA1584   463    LLCPF-CLKVIKIAtPYMHHYMKH    485  

SM00355: domain 7 of 9, from 491 to 513: score 8.0, E = 40
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C  +f + ++   H  +H   
    KIAA1584   491    HRCTK-CRLQFLTCkEKMDHKTQH    513  

SM00355: domain 8 of 9, from 660 to 683: score 11.9, E = 14
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C++ C + +s  +a+++Hm++ H   
    KIAA1584   660    VHCSF-CRYNTSCSkAYVNHMMsFH    683  

SM00355: domain 9 of 9, from 706 to 730: score 2.1, E = 1.8e+02
                   *->ykCpigCg..ksfssk.aLkrHmrvH<-*
                      ++C   C+     s  +++  H+ +H   
    KIAA1584   706    LVCLN-CDflSDVSGLdNMATHLSQH    730  

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