hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06282277/chunk_1/iprscan-20080502-06282277.nocrc
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Query sequence: KIAA1565
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02183.8.fs Homeobox associated leucine zipper              25.9    6.7e-07   4
PF00036.22.fs EF hand                                         24.6    1.1e-05   3
PF00036.22.ls EF hand                                         28.2    2.7e-05   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/3      50    78 ..     1    29 []    19.8  0.00024
PF00036.22.ls   1/3      50    78 ..     1    29 []    21.8   0.0022

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 3, from 50 to 78: score 19.8, E = 0.00024
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +lke+F+ fD+ g G +  eE+ +++++l   
    KIAA1565    50    RLKELFDSFDTTGTGSLGQEELTDLCHML    78   

PF00036.22.ls: domain 1 of 3, from 50 to 78: score 21.8, E = 0.0022
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +lke+F+ fD+ g G +  eE+ +++++l   
    KIAA1565    50    RLKELFDSFDTTGTGSLGQEELTDLCHML    78   

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