hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05570999/chunk_1/iprscan-20080502-05570999.nocrc
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Query sequence: KIAA1547
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03920.5.fs Groucho/TLE N-terminal Q-rich domain           327.4    4.3e-96   1
PF03920.5.ls Groucho/TLE N-terminal Q-rich domain           329.3      6e-96   1
PF00400.22.ls WD domain, G-beta repeat                       137.8    2.8e-38   6
PF00400.22.fs WD domain, G-beta repeat                       128.2    2.2e-35   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03920.5.ls   1/1     104   239 ..     1   138 []   329.3    6e-96
PF03920.5.fs   1/1     104   239 ..     1   138 []   327.4  4.3e-96
PF00400.22.fs   1/6     568   604 ..     1    38 []    16.4   0.0012
PF00400.22.fs   2/6     624   651 ..    10    38 .]    12.6    0.014
PF00400.22.ls   3/6     657   695 ..     1    38 []    26.7  7.7e-05
PF00400.22.fs   3/6     657   695 ..     1    38 []    24.7  5.4e-06
PF00400.22.ls   4/6     699   737 ..     1    38 []    40.6  5.1e-09
PF00400.22.fs   4/6     699   737 ..     1    38 []    38.6  6.7e-10
PF00400.22.fs   5/6     781   819 ..     1    38 []    19.2  0.00019
PF00400.22.fs   6/6     832   860 ..     9    38 .]    16.5   0.0011

Alignments of top-scoring domains:
PF03920.5.ls: domain 1 of 1, from 104 to 239: score 329.3, E = 6e-96
                   *->myPqsrrhpaalqapqqgplKftvaesldRiKeEFqfLqaqYHslKl
                      myPq+r hpa++q++q+g +Kftvaes+dRiK+EFqfLqaqYHslK+
    KIAA1547   104    MYPQGR-HPAPHQPGQPG-FKFTVAESCDRIKDEFQFLQAQYHSLKV 148  

                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKqaEivKRLnaiiaqllPf
                   E++KLa+EKtEmqRHYvmYYEmsYGLniEmHKq+Ei+KRLn+i+aq++Pf
    KIAA1547   149 EYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTILAQIMPF 198  

                   LsqeHqqqvlqAveRAKqvtmaELnaiigqqqlqaqqlsha<-*
                   LsqeHqqqv+qAveRAKqvtm+ELnaiigqqqlqaq+lsha   
    KIAA1547   199 LSQEHQQQVAQAVERAKQVTMTELNAIIGQQQLQAQHLSHA    239  

PF03920.5.fs: domain 1 of 1, from 104 to 239: score 327.4, E = 4.3e-96
                   *->myPqsrrhpaalqapqqgplKftvaesldRiKeEFqfLqaqYHslKl
                      myPq+r hpa++q++q+g +Kftvaes+dRiK+EFqfLqaqYHslK+
    KIAA1547   104    MYPQGR-HPAPHQPGQPG-FKFTVAESCDRIKDEFQFLQAQYHSLKV 148  

                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKqaEivKRLnaiiaqllPf
                   E++KLa+EKtEmqRHYvmYYEmsYGLniEmHKq+Ei+KRLn+i+aq++Pf
    KIAA1547   149 EYDKLANEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTILAQIMPF 198  

                   LsqeHqqqvlqAveRAKqvtmaELnaiigqqqlqaqqlsha<-*
                   LsqeHqqqv+qAveRAKqvtm+ELnaiigqqqlqaq+lsha   
    KIAA1547   199 LSQEHQQQVAQAVERAKQVTMTELNAIIGQQQLQAQHLSHA    239  

PF00400.22.fs: domain 1 of 6, from 568 to 604: score 16.4, E = 0.0012
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                        ++++l++    V++v +s +  +++ +g+  g++kiWd   
    KIAA1547   568    ARQInTLsHG-EVVCAVTISNP-TRHVYTGGK-GCVKIWD    604  

PF00400.22.fs: domain 2 of 6, from 624 to 651: score 12.6, E = 0.014
                   *->stVtcvafspdsgpllasgSrDgtikiWd<-*
                      + +++++  pd g++l+ g++  t+ iWd   
    KIAA1547   624    NYIRSCKLLPD-GRTLIVGGEASTLTIWD    651  

PF00400.22.ls: domain 3 of 6, from 657 to 695: score 26.7, E = 7.7e-05
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         k +l+    +++++a+spd  ++++s+++Dg+i +Wd   
    KIAA1547   657    PRIKaELtSSAPACYALAISPD-AKVCFSCCSDGNIAVWD    695  

PF00400.22.fs: domain 3 of 6, from 657 to 695: score 24.7, E = 5.4e-06
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         k +l+    +++++a+spd  ++++s+++Dg+i +Wd   
    KIAA1547   657    PRIKaELtSSAPACYALAISPD-AKVCFSCCSDGNIAVWD    695  

PF00400.22.ls: domain 4 of 6, from 699 to 737: score 40.6, E = 5.1e-09
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                       ++++ ++gHt++ +c+++s+d g+ l +g+ D+t++ Wd   
    KIAA1547   699    QTLVrQFqGHTDGASCIDISHD-GTKLWTGGLDNTVRSWD    737  

PF00400.22.fs: domain 4 of 6, from 699 to 737: score 38.6, E = 6.7e-10
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                       ++++ ++gHt++ +c+++s+d g+ l +g+ D+t++ Wd   
    KIAA1547   699    QTLVrQFqGHTDGASCIDISHD-GTKLWTGGLDNTVRSWD    737  

PF00400.22.fs: domain 5 of 6, from 781 to 819: score 19.2, E = 0.00019
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      +  k  l+ H+s V +++f+   g++++s + D+ +  W    
    KIAA1547   781    KPDKyQLhLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWR    819  

PF00400.22.fs: domain 6 of 6, from 832 to 860: score 16.5, E = 0.0011
                   *->tstVtcvafspdsgpllasgSrDgtikiWd<-*
                      +s+V ++++s d  +++++gS D++  +++   
    KIAA1547   832    SSSVLSCDISAD-DKYIVTGSGDKKATVYE    860  

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