hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05235071/chunk_1/iprscan-20080502-05235071.nocrc
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Query sequence: KIAA1527
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
SM00811                                                 280.3    1.4e-79   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
SM00811        1/1     579   786 ..     1   255 []   280.3  1.4e-79

Alignments of top-scoring domains:
SM00811: domain 1 of 1, from 579 to 786: score 280.3, E = 1.4e-79
                   *->sgkwtvsetrvki.kelkpFakGamRvAfrgkdlseddplfgsgtei
                      s +wt++et+v++++ l+   kG +R+Af+++         ++++ei
    KIAA1527   579    SELWTAQETIVYLgDYLTVKKKGRQRNAFWVHH--------LHQEEI 617  

                   VlKyfkkeyketvdeerYFeetLhLclrdvemQmvakefaeeFNkela.l
                     +y++k+yke++++ ++F+        dve+Qm+a+++++eFNk l++ 
    KIAA1527   618 LGRYVGKDYKEQKGLWHHFT--------DVERQMTAQHYVTEFNKRLYeQ 659  

                   npspkkieFlpsyvlelkrripaeydrsgpgffsyrttdtlevlkkiift
                   n+ p +i+++ps++l+++      +d +++g+                ++
    KIAA1527   660 NI-PTQIFYIPSTILLIL------EDKTIKGC----------------IS 686  

                   vEpfLeGeFvKYNsNnGwvndearstetserRteafeapqAFSHFTYerS
                   vEp++ GeFvK ++N+  v++e + te          + +A++HF+Ye S
    KIAA1527   687 VEPYILGEFVKLSNNTKVVKTEYKATE----------YGLAYGHFSYEFS 726  

                   ggslLVvDlQGVitkngd.LylLTDPqIHtedengfgfgkgNLGeeGIek
                   +++ +VvDlQG++t+ng++L++LTDPqIH+ d   ++   +N+G++GI +
    KIAA1527   727 NHRDVVVDLQGWVTGNGKgLIYLTDPQIHSVD---QKVFTTNFGKRGIFY 773  

                   FfatHk..CNaiC<-*
                   Ff++ + +CN+iC   
    KIAA1527   774 FFNNQHveCNEIC    786  

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