hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05085298/chunk_1/iprscan-20080502-05085298.nocrc
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Query sequence: KIAA1518
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 102.3    5.6e-26   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/5     691   721 ..     1    30 []    26.2   0.0045
SM00248    2/5     725   758 ..     1    30 []     5.7    8e+02
SM00248    3/5     763   792 ..     1    30 []    32.4  6.3e-05
SM00248    4/5     796   826 ..     1    30 []    23.8    0.024
SM00248    5/5     830   858 ..     1    30 []    14.2       19

Alignments of top-scoring domains:
SM00248: domain 1 of 5, from 691 to 721: score 26.2, E = 0.0045
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+T+LH+ +++ n  vv+ Lld+g+  +++   
    KIAA1518   691    NGNTALHYSVSHANFPVVQQLLDSGVcKVDK    721  

SM00248: domain 2 of 5, from 725 to 758: score 5.7, E = 8e+02
                   *->dGrTpLHlAaen.....gnlevvklLldkgadina<-*
                       G++p++l a  + ++++++e+v  L + g +ina   
    KIAA1518   725    AGYSPIMLTALAtlktqDDIETVLQLFRLG-NINA    758  

SM00248: domain 3 of 5, from 763 to 792: score 32.4, E = 6.3e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+L+lA+++g+++vvk+Ll   ad+n+   
    KIAA1518   763    AGQTALMLAVSHGRVDVVKALLACEADVNV    792  

SM00248: domain 4 of 5, from 796 to 826: score 23.8, E = 0.024
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      dG T+L++A+e+g++e++ lLl     di +   
    KIAA1518   796    DGSTALMCACEHGHKEIAGLLLAVPScDISL    826  

SM00248: domain 5 of 5, from 830 to 858: score 14.2, E = 19
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG T+L++A   g+ e++ +L ++  +i +   
    KIAA1518   830    DGSTALMVALDAGQSEIASMLYSRM-NIKC    858  

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